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Name : L483_05085 (L483_05085) Accession : YP_008092843.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 1109679 - 1110881 bp Length : 1203 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCCGACCTATCGCTACCTGGCCGTGGACCTCACCGGCAAGACCCGCAAGGCCAGCCTGCAGGCTGACAGCGAACGCCA TGCGCGCCAGTTGCTGCGCGAGCAGGGCCTGTTTGCCCGCCAGTTGCAGCGCCAGGACATCAGCAACCGGCAACCCCGGC GCCAGCGTCTGAGCCAGCCCCAACTGTGTGAGCTAACCCGTCAATTGGCGACGCTGACCGGTGCCGGCATCCCCTTGGTC GATGCCTTGGCCACCCTTGAACGCCAACTGCGCCAGCCGGCCCTGCACAGTGTGCTGGTGGCCCTGCGCGGCGCTCTCGC CGAAGGCCTGGGCCTGGCCCGCAGCCTGGCCCGCCAGGGGGCGCCGTTCACTGGCTTGTACTGCGCGTTGGTCGAGGCCG GCGAACGCTCCGGACGCCTGGCACAGGTGCTGACCCGGCTGGCCGACCACCTGGAACAGGTGCAACGGCAACAACACAAG GCGCGTACTGCGCTGATCTACCCCACCGTATTGATGGGCGTATCGCTTGCCGTGGTCATCGGCCTGATGACCTTTGTCGT GCCCAAGCTCACCGAACAGTTTGCCCACGCCGGGCAAAGCCTGCCGCTGATTACCGCGTTGCTGATCGGCCTGAGCCAGG GGCTGGTGCACGCCGGGCCCTGGTTGCTGGGGTTGGCGCTATTGACGGGTGGGCTTGGCACCTGGCTGCTGCGCAAGCCG CACTGGTGCCTGCGCCGTGACCAGTTGCTGCTGCGCTTGCCGCGTATCGGCAGCCTGTTGCAGGTGCTGGAAAGCGCACG CCTGGCGCGCAGCCTGGCGATTCTCAGCGGCAGTGGCGTGGCCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCGTCG GCAACCGGCGCATACGCCTGGCCATGGAGCAGGTGCGCCAGCAAGTGCAGGGCGGCACCAGCCTGCACCGTGCCCTGGAT GCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTCGGCAGCGGCGAGGCCAGCGGCACCCTGGCCGACATGCTCGA GCGTGTGGCCGACGACCAGGAGCGTGGCTTTGCGCGCCAGGTGGATACCGCCATGGCACTGTTCGAACCCCTGATGATCC TGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAACTG TGA Protein sequence : MPTYRYLAVDLTGKTRKASLQADSERHARQLLREQGLFARQLQRQDISNRQPRRQRLSQPQLCELTRQLATLTGAGIPLV DALATLERQLRQPALHSVLVALRGALAEGLGLARSLARQGAPFTGLYCALVEAGERSGRLAQVLTRLADHLEQVQRQQHK ARTALIYPTVLMGVSLAVVIGLMTFVVPKLTEQFAHAGQSLPLITALLIGLSQGLVHAGPWLLGLALLTGGLGTWLLRKP HWCLRRDQLLLRLPRIGSLLQVLESARLARSLAILSGSGVALLEALQVATETVGNRRIRLAMEQVRQQVQGGTSLHRALD ASQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLNQGLQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-41 | 41 |
