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Name : L483_05080 (L483_05080) Accession : YP_008092842.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 1108227 - 1109675 bp Length : 1449 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCTGCCCTATCGCCAGGCGCGGCAGAGCGGGGTGGCCATGACCACCACGGAACAGGGCTGGCAGCTGTGGCTGCGGCC CGACGCCGACAGTGCCCAGGTGCAGGAGCTGCTGCGGGTGCATGGCCAGCCGTGCAGGCTCGAATACCTGGAACCTGCCG TGTTCGATGAGCGCCTCGGCCAGCTGTACCAGGCTGGCGATGGCGCCACTGAAGCGCTGATCGAAGGCATTGGCGACCAG GTCGACCTGGACAGCCTGATGAGCGAGATGCCGCAGATCGAAGACCTGCTGGAAAGCGATGACGAAGCCCCGGTAATCCG CCTGATCAATGGTCTGTTCGGCCAGGCCCTGCGCCTGCGTGCCTCGGATATCCATATCGAAACCTTCGAGCAAAGCCTGG TGGTGCGCCTGCGGGTCGATGGCCACCTGCGCGAAGTGTTGCGCCCGCCACGTGCGCTGTCGGCCATGCTGGTGTCGCGG ATCAAAGTCATGGCACGCCTGGATATCGCCGAGAAGCGCCAGCCCCAGGACGGCCGTATTACCCTGCGCGCGGCAGGGCG TGAGGTGGATGTGCGGGTTTCGACCCTGCCCGGCATTCATGGCGAGCGCGTGGTCATGCGTGTGCTCGACAAGCAGGCCA GCTTGCTGGCGCTGGGCAACCTGGGTATGCCGCCCTCGGTATTGCAAGGCCTGCGCAGCTGCCTGGCCCGCCCCAATGGC ATCGTGCTGTCCACCGGCCCGACCGGTTCAGGCAAGACCACCACCCTGTACGCCAGCCTCAACAGCCTCAACGATGGCAG CCGCAACATCCTCACTGTCGAGGACCCGGTGGAATACGCCATCGCCGGCATCGGCCAGACCGCTATCAACCCGCGTGCGG GGCTGACCTTTGCCAGTGGCCTGCGTGCGATTCTGCGCCAGGACCCGGACGTGATCATGCTCGGCGAAATCCGTGACCAG GAAACCGCGCAGATCGCCGTGCAGGCCAGCCTGACCGGCCACCTGGTGCTGTCCACCCTGCACACCAACAGTGCCGTGGG CGCGGTGACCCGCCTGCGCGACATGGGCATCGAACCGTTCCTGATTGCCTCGTGCCTGCGTGGGGTGCTGGCCCAGCGCC TGGTGCGGCGCCTGTGCAGTTGCGCCGTAGCGCAGCCGCTGCAACATGCCGAGCGTGGCCTGTGGCCGGAACTGGCGGCG CTGGGTAGCAGCTACCACCCGGTGGGCTGCGAGCTGTGCCAGGGCAGCGGCTATGTCGGGCGCGTGGGCCTGTACGAATT CATCGAGCTGGATGCCGGGCTGATCGGCTTGCTGTATGACGGCGCCAGTGAACTGGCCATGCAGGATTACCTGGCCGAAC GCCGGCAGAGCCTGGTCGCGATGGCCAGCGACTGCCTGGCCCGTGGCGAGACCAGCCTGGCCGAAGTGCTGCGCGTGGTG CAGGGCTAA Protein sequence : MLPYRQARQSGVAMTTTEQGWQLWLRPDADSAQVQELLRVHGQPCRLEYLEPAVFDERLGQLYQAGDGATEALIEGIGDQ VDLDSLMSEMPQIEDLLESDDEAPVIRLINGLFGQALRLRASDIHIETFEQSLVVRLRVDGHLREVLRPPRALSAMLVSR IKVMARLDIAEKRQPQDGRITLRAAGREVDVRVSTLPGIHGERVVMRVLDKQASLLALGNLGMPPSVLQGLRSCLARPNG IVLSTGPTGSGKTTTLYASLNSLNDGSRNILTVEDPVEYAIAGIGQTAINPRAGLTFASGLRAILRQDPDVIMLGEIRDQ ETAQIAVQASLTGHLVLSTLHTNSAVGAVTRLRDMGIEPFLIASCLRGVLAQRLVRRLCSCAVAQPLQHAERGLWPELAA LGSSYHPVGCELCQGSGYVGRVGLYEFIELDAGLIGLLYDGASELAMQDYLAERRQSLVAMASDCLARGETSLAEVLRVV QG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-107 | 57 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-107 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| L483_05080 | YP_008092842.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-106 | 56 |
| L483_05080 | YP_008092842.1 | general secretion pathway protein E | VFG0182 | Protein | 7e-105 | 55 |
| L483_05080 | YP_008092842.1 | general secretion pathway protein E | VFG1876 | Protein | 9e-112 | 51 |
| L483_05080 | YP_008092842.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-64 | 47 |
| L483_05080 | YP_008092842.1 | general secretion pathway protein E | VFG1880 | Protein | 9e-69 | 46 |
| L483_05080 | YP_008092842.1 | general secretion pathway protein E | VFG0112 | Protein | 3e-70 | 41 |
