Gene Information

Name : CCALI_00290 (CCALI_00290)
Accession : YP_008088269.1
Strain : Chthonomonas calidirosea T49
Genome accession: NC_021487
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 321835 - 324462 bp
Length : 2628 bp
Strand : +
Note : -

DNA sequence :
ATGCGCATGGATAAATTGACCATCAAAGCTCAAGAGGCGGTGCAGGACGCCCAGCAACAGGCTGTGACACATCAGAACGT
GCAGATTGACGTTGAGCATCTGCTTGCCGCTTTGCTTCAACAGACGGATGGTGTAACTCAACCTATTCTTCAGAAACTCG
GAGTGAACGTGCCGGTGCTGGAACGTCAACTTGAAGCGGAGATTGAGAAGCTACCTAAAGTTTCCGGCTCGGCGGAGCAT
GGATCAACGATATCCCCGCGCCTTCGCAACGTTTTTAACATCGCGTTTTCAGAGGCCGAGAGGATGCAGGATGAGTACGT
AAGCACAGAGCATTTGTTACTCGGTATCGTTGCGGACGGCCAGAGCGGTGCGGCGAGGCTTCTTAAAGCGCAGGGAGTAA
CGCAGGACAACTTATTGCAGGCATTACGCGACGTGCGCGGGAATCAGCGGATTGTTGACCCCAACCCCGAAGAGAAATAC
CAAGCTTTGGAGAGGTATGGTCGTGATCTAACCGAAGAGGCACGCAAGCAGAAGTTAGACCCGGTGATCGGGCGTGATGA
AGAGATACGCCGTGTTATTCAGGTGCTCTCACGGCGTACAAAGAACAACCCGGTTTTAATTGGAGAACCTGGAGTCGGGA
AGACGGCTATTGTAGAGGGTTTGGCACAGCGCATTGTGGAAGGAGACGTGCCTGAGGGATTACGTAATAAGCGCATCATC
GCGCTTGATCTCGGCTCTTTAATTGCAGGCACGAAATATCGTGGCGAGTTTGAGGAGCGCCTAAAGGCTGTTCTCAAAGA
GATCGCGCGTGCTGAAGGCTCCATCATTCTGTTTATAGATGAGATCCACACCATTGTTGGAGCAGGTGCAGCCGAGGGCG
CCATGGATGCCTCCAATATGCTGAAGCCGATGTTGGCACGCGGTGAACTGCGCTGCATCGGTGCCACCACGCTCGATGAG
TACCGAAAACACATCGAGAAAGATGCCGCTCTTGAGCGACGCTTCCAACCGATCTACGTTGGCGAGCCATCTGTAGAGGA
CACAATCGCCATTTTGCGAGGTTTGAAGGAGCGCTATGAGGTTCATCATGGCGTGCGCATCACCGACAGCGCTCTGGTGG
CAGCAGCGGTGCTTTCGCATCGCTACATATCCGACCGATTTTTGCCAGACAAGGCCATAGATCTAGTGGATGAAGCTGCC
TCACGTCTGCGTATCGAGATCGACTCGATGCCGGCAGAGATTGATGCGGTGGAGCGCAGGATACGCCAGTTAGAGATCGA
GCGTATGGCGTTGTCGAAGGAGACCGATGAAGCCGGCAAAGAGCGTCTTGCAAAGATCGAGCAGGAGTTAAGCGAACTGC
GCGAGCAGTCGGCACAACTGAAGGCTCGTTGGGAGAATGAGAAGCGGGTGATCCAAAAGATCAGCAAGACGAAGCAGGAG
ATCGAGCAGACTCGGTTGCAGGCGGAGGCTGCAGAGAGAGAGGGCGACTTAGCGAAAGCCGCTGAGCTTCGGTACGGGGT
AATGCACGCGCTGAACAAGCGCTTAGAGCAGGAACAAGCCGAACTTCGGGAGGTGCAGCAGGGTGGTCAGGCCCTGTTGA
AAGAGGAGGTAACAGCGGACGATATCGCCGAGATCGTCAGCAAATGGACGGGCATTCCCGTGAGCCGCATGTTGGAGGGT
GAGATGCAGAAGCTGCTCCACATGGAGGAGCGACTTCGCCAGCGTGTGGTCGGTCAAGATGAGGCGATTACGGCGGTGGC
TAACGCTGTACGGCGTTCACGCTCCGGTTTGGCCGATCCGAACCGACCCATCGGCAGCTTCATGTTTCTCGGCCCGACCG
GTGTGGGTAAAACGGAGTTGGCACGTGCGTTGGCCGAGTTCCTCTTTGACGACGAGCGCGCCATGGTGCGCATTGACATG
AGCGAATATATGGAGAAGCACTCGGTGGCGCGACTGATCGGTGCCCCGCCGGGATATGTGGGCTATGAGGAGGGAGGTCA
GCTGACGGAAGCGGTACGGCGCCGGCCCTACTCGGTGATTCTCTTTGATGAGATCGAAAAGGCGCATCCGGATGTTTTCA
ACGTGTTGCTGCAGCTTTTGGATGATGGCCGATTGACCGATGGACAGGGTCGCACGGTGGACTTCCGGAACACCGTGGTC
ATCATGACCTCGAATATCGGAAGTCACATTATCCAGGAACTTGCGCTCACCGACCCGGCTCTCATGCGCCAGCGGGTCAT
GGAGGCGGTCCAAGCTCACTTCAGGCCGGAGTTTCTAAACCGCATTGACGAGATCATCCTCTTCAAGAGCTTGACGATGG
AAGAGATTCGAGAGATTGTAGAGATACAACTCGGGCTTTTACGCAAACGCTTGGCCGAAAAGAAGATCACCCTAACACTT
ACGCCCAAGGCACGCGAGGCGGTTGCTCTGGCGGGTTACGACCCGGTATATGGGGCGCGACCGCTTAAACGGGCAATCCA
ACGGTTGATCGCCGACCCATTGGCTCAGAAACTATTGGCCGGCGAGTTCCGTGAAGGTGACCATATTCTTGTAGACGCAA
ACGCAGAAGGGGTCCTCTCCTTCCAGCGTGCGCCGGAGGTCATTGAGACAACGGTCGTGGGAAGTTAA

Protein sequence :
MRMDKLTIKAQEAVQDAQQQAVTHQNVQIDVEHLLAALLQQTDGVTQPILQKLGVNVPVLERQLEAEIEKLPKVSGSAEH
GSTISPRLRNVFNIAFSEAERMQDEYVSTEHLLLGIVADGQSGAARLLKAQGVTQDNLLQALRDVRGNQRIVDPNPEEKY
QALERYGRDLTEEARKQKLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVEGDVPEGLRNKRII
ALDLGSLIAGTKYRGEFEERLKAVLKEIARAEGSIILFIDEIHTIVGAGAAEGAMDASNMLKPMLARGELRCIGATTLDE
YRKHIEKDAALERRFQPIYVGEPSVEDTIAILRGLKERYEVHHGVRITDSALVAAAVLSHRYISDRFLPDKAIDLVDEAA
SRLRIEIDSMPAEIDAVERRIRQLEIERMALSKETDEAGKERLAKIEQELSELREQSAQLKARWENEKRVIQKISKTKQE
IEQTRLQAEAAEREGDLAKAAELRYGVMHALNKRLEQEQAELREVQQGGQALLKEEVTADDIAEIVSKWTGIPVSRMLEG
EMQKLLHMEERLRQRVVGQDEAITAVANAVRRSRSGLADPNRPIGSFMFLGPTGVGKTELARALAEFLFDDERAMVRIDM
SEYMEKHSVARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQLLDDGRLTDGQGRTVDFRNTVV
IMTSNIGSHIIQELALTDPALMRQRVMEAVQAHFRPEFLNRIDEIILFKSLTMEEIREIVEIQLGLLRKRLAEKKITLTL
TPKAREAVALAGYDPVYGARPLKRAIQRLIADPLAQKLLAGEFREGDHILVDANAEGVLSFQRAPEVIETTVVGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-116 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-113 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 8e-114 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CCALI_00290 YP_008088269.1 ATP-dependent chaperone ClpB VFG2084 Protein 4e-114 43
CCALI_00290 YP_008088269.1 ATP-dependent chaperone ClpB VFG2076 Protein 3e-133 41