|
Name : CCALI_02671 (CCALI_02671) Accession : YP_008090549.1 Strain : Chthonomonas calidirosea T49 Genome accession: NC_021487 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 3145347 - 3146096 bp Length : 750 bp Strand : + Note : - DNA sequence : ATGCTAGATATTGTCGGCATCATTCCCGCGCGCCTAGCTGCTACCCGTCTGCCCAACAAGCCGTTGGCAGATATTGGGGG ACAGCCCATGATCGTGCACGTTTGGCAACGCGCTCAGCAGTCGGCTTCTTTGCAAGAGGTTTGGGTAGCTACCCCAGACG CAGCCATCGTGGAGGTGGTTGAGAAGAGGGGAGGGAAGGCTCTCTTGACCTCTAAGGAGCACCGCACGGGTACCGATAGG GTTGCGGAGGCCGCAAGGCTACTAGGGCTCTCCGAGGAGGCGATCGTTGTGAACATTCAGGGGGATGAGCCTCTTTTGGA GGCGGAGAGTATTGACCGCATGGTAGAGTTGCTTCGTGCCAACCTCTCACTTGATATGGCCAGTGTGATGTGTCCCTGCC CGCAAGAGAGTTGGGAAGACCCTGCGTGTGTCAAGGTAGTCTGTGGACGGCAGGGCGATGCGCTCTACTTTTCCCGCTCC CGCATTCCCTATCCACGGCAAGAGCCCTCCCTACCGGTAATGCAGCATATTGGGCTATATGCCTACCGGAATCGCTTTTT GCAGCTTTTTACCACCCTAGAGCCGACTCCATTGGAGTGCACCGAATCTTTAGAGCAGTTGCGAGCGCTGGAGTGGGGCT ATCGCATTCGGATGGTGCGTGTGGAGAGGGCTCCTATTGCAGTAGATACACCAGAGGATTTAGAAAAGGTGCGACAACTT CTCAAGACCAGTCCTCCTTCCCTAGAGTAG Protein sequence : MLDIVGIIPARLAATRLPNKPLADIGGQPMIVHVWQRAQQSASLQEVWVATPDAAIVEVVEKRGGKALLTSKEHRTGTDR VAEAARLLGLSEEAIVVNIQGDEPLLEAESIDRMVELLRANLSLDMASVMCPCPQESWEDPACVKVVCGRQGDALYFSRS RIPYPRQEPSLPVMQHIGLYAYRNRFLQLFTTLEPTPLECTESLEQLRALEWGYRIRMVRVERAPIAVDTPEDLEKVRQL LKTSPPSLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-37 | 44 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-37 | 44 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-37 | 44 |
