Gene Information

Name : CCALI_00246 (CCALI_00246)
Accession : YP_008088226.1
Strain : Chthonomonas calidirosea T49
Genome accession: NC_021487
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.4.12
Position : 267456 - 269558 bp
Length : 2103 bp
Strand : -
Note : -

DNA sequence :
ATGTCCGAAAAAACAGCGTTCCCTCTTACCCTCGATACACCCCTTCAATATGTGAAAGGCGTGGGACCGCTCATCGCTCA
ACGATTAGCAAAACTCAACCTTCACACAGCAGGAGACCTCCTTCGCCACTATCCACGAAGATGGGAGGATAGAACTCTGT
TTGCCCATGCCGCACAACTGCGCGGCGGCGAGTTCGTGACGCTCTGTGGGCTACCCCTCTCCGTTAGTACCACCCAGCCA
CGGCCTGGACTGTCCCTTACAAAAGCTCTTCTCGACGACCAGGGCGCGGCTGTCATGCTTGTCTGGTTTAATCAACCCTA
TATGGAGCAGGTCTTCCGCAAACTGATCACGGCAAAACACCCCGTCGTGGTCTACGGCCAGGCAAAACGCTCCGGTATGA
TCGTCGAAATCCAAAACCCAGAATGGGAGCCCCTAGACGAAACGGGCGACTCGCTCTCAAGTGGGCGCATCACCCCCGTC
TATCCAGCTACCGAAGGGATAACCCAAGCACGCCTTCGCCGTCTCACTGATCACGTGCTGCGTGAATGCTTGCCGCTTAT
TGACGAGCCACTGCCGCCTGAACTGCGCCAAAGATACCGCCTCATAGAGCTACGCGAAGCTCTTCAAAACATCCACTATC
CCACCACCTTTGAGGCTCTCGATGCCGCGCGCAGGCGCCTCGTCTTTGAGGAGTTCTTCTTCATGCAACTCTATCTTGCC
CTCCAACGTCACAAACTCCACACAAACTCGCAAGGCATTCGCTTTCATGTCTCCCTTGAGAAGCTGCACCAATCGCTCCA
AGCCGTCCTCCCCTTCCCTCTTACCAAAGCGCAACAACGAGCCATCGCGGAGATCGCTTCCGACATGAGCAGTGGTCATC
TTATGAACCGGCTAGTTCAAGGCGATGTGGGCAGTGGCAAAACAATGGTCGCTCTCGCTGCTATCCTTATGACCGTACAA
AACGGCTATCAGGCCGCCCTCATGGCTCCAACGGAGATTCTGGCGCAACAACACGCCATCGTGCTGCAACGTCTCCTTGC
CCCCCTCCACTTACGTGTGGAGCTAGCCATTGGCAGTCTCTCAAAACGTGAAAAACAGGAGGTTTATGAACGATTGCGCA
CAGGGGAAAGCCTCATCGCCGTCGGTACCCATGCACTCATTCAAGAGGAGGTCGGATTCGCTCGTCTCGGCCTCGCTATC
ATAGATGAGCAACACCGTTTCGGCGTACTTCAACGTCGAGCGCTCTCTCGCAAAGGCGATCAACCTCATGTGCTTGTTAT
GACGGCTACTCCTATCCCCCGCACCCTTACCCTCACCCTGTATGGAGACCTCGACGTCTCCGTGCTCGATGAACTGCCGC
CAGGACGAAAACCGATTACGACTCACTGGCGAAGCCGCTCCAAACGCGAGCAGGTTTACGCCGCTGCGGAACGTCTGCTT
TCAGATGGTCGTCAAGCCTATATCGTCTGCCCTCTCATCGAAGAGAGCGAAAAACTAGAAGCACAAAGTGCCGCGAAGCT
CTATGACTACATTGCCAACAAAGTCTATCCTCATCGAAGAGTAGGGTTGCTACATGGCCAAATGCCGCCATCGGAAAAGG
AGCAGGTCATGCTGCGGTTCAAAGCTCACGAGCTTGACGTGCTTGTCTCTACCACTGTTATCGAAGTAGGAATAGATGTT
CCCAACGCTTCCATTATCATTATTGAGGATGCCGACCGTTTTGGGCTAGCTCAGCTGCACCAGCTACGCGGTCGCGTAGG
CCGTGGAGAATATCCTTCTTACTGCATTCTTCTTGCAGACCCCAAAACTCCCGAAGGCAAGGCTCGTATGGAGATCATGG
TAAAAACCTGCGACGGCTTCCGCATCGCGGATGAAGATCTGCAGTTGCGCGGGCCCGGTGAGTTCCTTGGCACAAAGCAA
AGTGGCCTACCCAACCTTCATATCGCCGATCTCTTAGCAGACCGTGACGTCCTTGTTGAGACGCGTACCGCCGCCTTTGA
ACTTGTAAAACAAGACCCTACCCTCTCTTCTCCTCAGCATCGTACGCTGCGAGAAGCCCTCCAGCGAATGCACACACATC
TTGAACTCGCCTCTGTAAGCTAA

Protein sequence :
MSEKTAFPLTLDTPLQYVKGVGPLIAQRLAKLNLHTAGDLLRHYPRRWEDRTLFAHAAQLRGGEFVTLCGLPLSVSTTQP
RPGLSLTKALLDDQGAAVMLVWFNQPYMEQVFRKLITAKHPVVVYGQAKRSGMIVEIQNPEWEPLDETGDSLSSGRITPV
YPATEGITQARLRRLTDHVLRECLPLIDEPLPPELRQRYRLIELREALQNIHYPTTFEALDAARRRLVFEEFFFMQLYLA
LQRHKLHTNSQGIRFHVSLEKLHQSLQAVLPFPLTKAQQRAIAEIASDMSSGHLMNRLVQGDVGSGKTMVALAAILMTVQ
NGYQAALMAPTEILAQQHAIVLQRLLAPLHLRVELAIGSLSKREKQEVYERLRTGESLIAVGTHALIQEEVGFARLGLAI
IDEQHRFGVLQRRALSRKGDQPHVLVMTATPIPRTLTLTLYGDLDVSVLDELPPGRKPITTHWRSRSKREQVYAAAERLL
SDGRQAYIVCPLIEESEKLEAQSAAKLYDYIANKVYPHRRVGLLHGQMPPSEKEQVMLRFKAHELDVLVSTTVIEVGIDV
PNASIIIIEDADRFGLAQLHQLRGRVGRGEYPSYCILLADPKTPEGKARMEIMVKTCDGFRIADEDLQLRGPGEFLGTKQ
SGLPNLHIADLLADRDVLVETRTAAFELVKQDPTLSSPQHRTLREALQRMHTHLELASVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-91 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CCALI_00246 YP_008088226.1 ATP-dependent DNA helicase RecG BAC0356 Protein 9e-100 44