Gene Information

Name : CCALI_02068 (CCALI_02068)
Accession : YP_008089978.1
Strain : Chthonomonas calidirosea T49
Genome accession: NC_021487
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 2437058 - 2438203 bp
Length : 1146 bp
Strand : -
Note : -

DNA sequence :
ATGGAGTTTGCGACTCGTGCTATTCACGCGGGGCAAGAGCCAGAACAGACGACCGGTGCGGTCATTCCCCCCATCTACCC
CACGACGATCTATGCTTTCGAGGAGCCTGGCGTAAGCCGCGCCGGCTATGAGTATATCCGTTATGGCAACCCAACACGTC
ATGCTTTAGAAACCTGTTTGGCCTCTCTAGAGGAGGCTCCAGCCGAATGCCCTGCCCTCTGCTTTAGCTCCGGCATGGCC
GCCATAGATGCCGCTTTTCGACTGCTGCGCCCCAACGATCGGCTCTTGCTGGCACGTGACGTGTATGGGGGTACAACGCA
CCTCGCTGAGACCATTTTGCGCCCTAACGGCGTTGTGGTAGAGTACGCCGACGCCTCCAATACGGAGCTCTTCATCGAGG
CCATCACCCCAGGCACCTGCATGGTCTGGCTGGAAACCCCTGCAAACCCCCTCCTACAGCTCACCGATATCGCGGCGGTG
GTGCAGGCCGCACATGATGCGGGCGCCCTCGTGGCCGTAGACAACACCTTCGCCACACCCTATCTCCAAAACCCGCTCGC
GCTCGGAGCCGACATCGTGATGCACTCCTCCACAAAGTACCTCGGAGGCCACTCCGACGCGTTGGGCGGCGCGCTTGTTG
TGCGCGACCCCGCCTTGCGCGCTCGTCTATGGGAAATCCAAAAAGTAACCGGTGCCGTGGCCTCCCCCTTTGACTGCTGG
CTAACGCTGCGCGGCATTCGCACGCTGGCCGTGCGAATGCAAACTCATTGTGAAAACGCCCTGCGCATAGCCCAATTTCT
TATGGGGCATCCTCGAGTCCGCACCGTCTACTACCCGGGATTGACAGACCCAAACCAGCGCCCCCTGGTGCAGAAACAGA
TGCGCGGTATGGGAGGCGGCATGGTCTCTATGGAGCTAGAGGTGGCCGACGCCGAGAAGTTGCTAAAAAGCACCACGCTC
TTTACTCTAGCTGGCAGCCTTGGCGGTGTGGAGAGCATCATCAGCTATCCGGCGAAGATGTCGCATGCAGCGCTGCCTGT
GGAGGAACGCCGGGCACGGGGTATTAGCGACGGCCTTGTACGCCTTTCGGTAGGCCTCGAAAATGTGGAAGATCTGATCG
CCGACCTTGAGCAAGCCCTTGGGTAA

Protein sequence :
MEFATRAIHAGQEPEQTTGAVIPPIYPTTIYAFEEPGVSRAGYEYIRYGNPTRHALETCLASLEEAPAECPALCFSSGMA
AIDAAFRLLRPNDRLLLARDVYGGTTHLAETILRPNGVVVEYADASNTELFIEAITPGTCMVWLETPANPLLQLTDIAAV
VQAAHDAGALVAVDNTFATPYLQNPLALGADIVMHSSTKYLGGHSDALGGALVVRDPALRARLWEIQKVTGAVASPFDCW
LTLRGIRTLAVRMQTHCENALRIAQFLMGHPRVRTVYYPGLTDPNQRPLVQKQMRGMGGGMVSMELEVADAEKLLKSTTL
FTLAGSLGGVESIISYPAKMSHAALPVEERRARGISDGLVRLSVGLENVEDLIADLEQALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-69 44
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-70 43
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-53 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CCALI_02068 YP_008089978.1 cystathionine gamma-lyase BAC0207 Protein 1e-61 44