Gene Information

Name : CCALI_01649 (CCALI_01649)
Accession : YP_008089576.1
Strain : Chthonomonas calidirosea T49
Genome accession: NC_021487
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1955126 - 1956475 bp
Length : 1350 bp
Strand : -
Note : -

DNA sequence :
ATGACGCAGTTAGAGGCAGCAAGAAAAGGCCATATTACCGAACAGATGGCCTATGTGGCGGAGCGCGAAGGCGTTTCACC
GGAGTTTGTTCGTGAGCAGGTTGCAGCCGGACGTGTGGTTATTCCGGCCAATCCAAACCATACAACTCTCAGCCACTTCA
CCGCTATTGGGGAAGGGATGCGCGTAAAAATTAACGCGAACCTGGGCACCTCCTACGACTATGTCCACCCGGACGAAGAG
GTAGAAAAGGTAAAAGTGGCCATTCAGTACGGTGCTGACACGGTGATGGATCTCTCCACGGGCGGAGATATCGCCGCCAT
TCGGCAGAGAACTCTGGAAGCGAGCACCGTTCCCCTTGGCACCGTGCCTATCTATGAGGCCGAGTTTCGCGCGGCCAAAC
GCAAGAGCTTCTTCGATATGACTGCCGATGAACTGTTTGAGGTTATCGAGGAGCATGGGAAGTCTGGGGTGGACTACATC
ACCGTGCACTGCGGTGTGACCCGCGAGGCGTTAATGCGCTACCAAAACACGCACCGCACCACGGGCATTGTGTCGCGTGG
TGGCGGACTTTTGGCCGCCTGGATGCTGAAGCGTGAGGAGGAAAACCCGCTTTGGGAGCGCTTTGATGATCTGCTGGACA
TCGCGCGAACCTACGACATGACCCTTTCTCTGGGAGATGGCCTTCGGCCGGGGTCGCTTGACGATGCCACCGATCGCCCG
CAAATTCAAGAGCTCTTGCTGATTGGAGAGCTCGTGGAGCGCTCTCGACGAGCGGGTGTGCAGGCGATGGTCGAAGGGCC
GGGGCATATTCCTCTCAACGAGATACAGACCAACGTGCAGATCCAGAAGAAGCTGACACGCCACGCCCCCTTCTACATTT
TGGGAATGCTGCCCATAGATACCGGTGCGGCATTTGATCACATTGTGGGCGCTATCGGAGGGGCCGTGGCCGGTTGGCAT
GGCGCCGACATGCTTTGCTACCTCACTCCTGCCGAACATTTGGGGCTGCCGACGGTGGAGCATGTGAAAGAGGGGGTCAT
CGCCTTTAAGCTGGCTGCGCATATCGCCGATGTCGCGCGCGGCAATAAAGCCGACTGGGAGCGCAACCGCCAGATGAGCG
AGGCGCGGTATCGGCTCGATTGGCAGAAACAGTTCGAGCTGGCCCTCTTCCCCGAGGAGGCGCGGGCGATGTACGAGGCG
CGTGGCACAAAAACCAAAGCCTGCAGCATGTGTGGGCCCTTCTGCCCTATGAACCTAGTCGAGGTGGTCATGCGGGGACG
GCGCGGCGCCGCTCATGGGACGACGCAGTTGCCTCTGGAAGAGGTCATCGGAGCGGAAGTCACCACGTAA

Protein sequence :
MTQLEAARKGHITEQMAYVAEREGVSPEFVREQVAAGRVVIPANPNHTTLSHFTAIGEGMRVKINANLGTSYDYVHPDEE
VEKVKVAIQYGADTVMDLSTGGDIAAIRQRTLEASTVPLGTVPIYEAEFRAAKRKSFFDMTADELFEVIEEHGKSGVDYI
TVHCGVTREALMRYQNTHRTTGIVSRGGGLLAAWMLKREEENPLWERFDDLLDIARTYDMTLSLGDGLRPGSLDDATDRP
QIQELLLIGELVERSRRAGVQAMVEGPGHIPLNEIQTNVQIQKKLTRHAPFYILGMLPIDTGAAFDHIVGAIGGAVAGWH
GADMLCYLTPAEHLGLPTVEHVKEGVIAFKLAAHIADVARGNKADWERNRQMSEARYRLDWQKQFELALFPEEARAMYEA
RGTKTKACSMCGPFCPMNLVEVVMRGRRGAAHGTTQLPLEEVIGAEVTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 1e-75 44
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 1e-75 44