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Name : CCALI_01602 (CCALI_01602) Accession : YP_008089530.1 Strain : Chthonomonas calidirosea T49 Genome accession: NC_021487 Putative virulence/resistance : Virulence Product : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Function : - COG functional category : - COG ID : - EC number : - Position : 1898945 - 1899631 bp Length : 687 bp Strand : - Note : - DNA sequence : ATGTCTGAAGCCGCTCGCATTCTTGTGGTGGACGATGAGCAGCCAATCGCGGAGGCAATAGCCTACAACCTAAAAAAAGA GGGGTTCTCTGTGCAGACGGCAGCCGATGCCGAGACCTGTCTTGAACTTGTGCGCACGACACCGCCCTCTCTGGTCATTC TCGACATTATGCTGCCCTCCATTAGTGGCTTCGACGTGTGTCGCCTGTTGCGTCGCCAGGGAGACATCCCCATTATTATG CTAACGGCTCGCACGGGGGAACACGACCGCGTGAAAGGGCTTGAACTCGGTGCCGACGATTATGTTACCAAGCCGTTCAA CATGCGTGAGCTTATTGCGCGCGTGCGAAGCGTGCTGCGGCGTACCGCGCCCTCGCACGACAAAGATGAGACCATTAAGA TAGGGAACCTCTTTATAGATGTTGGTCGGCATGAAGCTCGATTGGGTGAGAGGCCCTTAAACCTCGCTCCAAAAGAGTTC GACCTCCTGCGTTTTCTTGCTACCCATCCCGGCCGTGTATTTACACGCCAAATGCTTCTCGATCGCGTCTGGGGCACGGA GGCTTTTGTGGATGAACGCACGGTGGATGTGCATATCCGCTGGCTACGGGAGAAGATAGAAGAAGACCCCTCCAATCCGC GCCGACTTATTACGGTGAGGGGTGTGGGCTACAAGTTCGCCGAATAG Protein sequence : MSEAARILVVDDEQPIAEAIAYNLKKEGFSVQTAADAETCLELVRTTPPSLVILDIMLPSISGFDVCRLLRRQGDIPIIM LTARTGEHDRVKGLELGADDYVTKPFNMRELIARVRSVLRRTAPSHDKDETIKIGNLFIDVGRHEARLGERPLNLAPKEF DLLRFLATHPGRVFTRQMLLDRVWGTEAFVDERTVDVHIRWLREKIEEDPSNPRRLITVRGVGYKFAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-33 | 41 |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-39 | 41 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 4e-39 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_012469.1.7685629. | Protein | 2e-49 | 49 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | AE000516.2.gene3505. | Protein | 2e-42 | 48 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_002952.2859905.p0 | Protein | 5e-47 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_002745.1124361.p0 | Protein | 4e-47 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_009782.5559369.p0 | Protein | 4e-47 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_002951.3237708.p0 | Protein | 4e-47 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_007622.3794472.p0 | Protein | 5e-47 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_002758.1121668.p0 | Protein | 4e-47 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_009641.5332272.p0 | Protein | 4e-47 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_013450.8614421.p0 | Protein | 4e-47 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_007793.3914279.p0 | Protein | 4e-47 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_003923.1003749.p0 | Protein | 4e-47 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_012469.1.7686381. | Protein | 2e-48 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | HE999704.1.gene2815. | Protein | 7e-48 | 46 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_014475.1.orf0.gen | Protein | 2e-42 | 43 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_005054.2598277.p0 | Protein | 2e-42 | 43 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | BAC0197 | Protein | 2e-32 | 43 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | CP001918.1.gene5135. | Protein | 7e-27 | 42 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | AE016830.1.gene1681. | Protein | 3e-44 | 42 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | AM180355.1.gene1830. | Protein | 3e-38 | 42 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | BAC0347 | Protein | 9e-35 | 41 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | BAC0111 | Protein | 1e-36 | 41 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | CP001138.1.gene4273. | Protein | 4e-30 | 41 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | HE999704.1.gene1528. | Protein | 8e-32 | 41 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | CP004022.1.gene3215. | Protein | 2e-34 | 41 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | AF155139.2.orf0.gene | Protein | 3e-43 | 41 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | CP000034.1.gene3671. | Protein | 4e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | VFG1389 | Protein | 2e-32 | 43 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | VFG1390 | Protein | 9e-40 | 42 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | VFG0596 | Protein | 4e-34 | 41 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | VFG1563 | Protein | 9e-40 | 41 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | VFG1702 | Protein | 1e-39 | 41 |
| CCALI_01602 | YP_008089530.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | VFG1386 | Protein | 1e-38 | 41 |
