Gene Information

Name : CCALI_01463 (CCALI_01463)
Accession : YP_008089394.1
Strain : Chthonomonas calidirosea T49
Genome accession: NC_021487
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system,ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1723073 - 1723840 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGATGTGATCATTGAGGTCACAAACGTTCATAAAATCTACCGGATGGGCAAGACGGAGGTGCACGCCCTGCGCGG
CGTCTCCGTCTCCATCCGAAGAGGCGAGTTCGTGGCCATCATGGGCCCTTCCGGCTCCGGAAAATCCACCTTCATGAACA
TCGTGGGCTGCCTCGACACGCCCACTCGTGGCTCCTATAAGCTGGATGGCATCGAAGTCGCCAAACTTAACGACAACCAA
CTTGCCGAAATTCGCAACCGCAAAATTGGTTTCGTCTTCCAAACCTTCAATCTGCTGGCGCGCACAACCGCCCTGGAAAA
CGTGGAGCTGCCAATGCTCTATAGCAACGCGCGCAACCGCCGTCAAATGGCCATTCGCGCCTTGGAAATCGTTGGGCTGG
GCGAACGCCTTCACCACAAACCCAACGAGCTGTCCGGCGGCCAACAACAGCGCGTTGCCATCGCCCGTGCGCTCGTAAAC
GACCCGCCCATCCTCTTCGGAGATGAGCCTACCGGCAACCTCGACTCGCGAACGAGCGAAGAGATTATGGCCATCTTCCA
ACGCCTGCATAGGGAAGGCAAAACGGTGGTGCTTGTAACCCACGAACCCGACATCGCCGAACATGCCGAGCGCATCATTC
GATTTCGTGATGGTAAGGTGGTCGCGGATGAACCGGTTCTCAATCGCCGGATCGCTGAGGTAGAGCTGGAAAGGCTCGGC
GGGCCGCTTGAGGAAGAAGATACCGAGCTGCTTTCTGAAACCACTTAG

Protein sequence :
MSDVIIEVTNVHKIYRMGKTEVHALRGVSVSIRRGEFVAIMGPSGSGKSTFMNIVGCLDTPTRGSYKLDGIEVAKLNDNQ
LAEIRNRKIGFVFQTFNLLARTTALENVELPMLYSNARNRRQMAIRALEIVGLGERLHHKPNELSGGQQQRVAIARALVN
DPPILFGDEPTGNLDSRTSEEIMAIFQRLHREGKTVVLVTHEPDIAEHAERIIRFRDGKVVADEPVLNRRIAEVELERLG
GPLEEEDTELLSETT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CCALI_01463 YP_008089394.1 ABC-type antimicrobial peptide transport system,ATPase component NC_012469.1.7686878. Protein 2e-58 54
CCALI_01463 YP_008089394.1 ABC-type antimicrobial peptide transport system,ATPase component NC_008702.1.4606598. Protein 5e-46 46
CCALI_01463 YP_008089394.1 ABC-type antimicrobial peptide transport system,ATPase component CP001581.1.gene598.p Protein 3e-43 44
CCALI_01463 YP_008089394.1 ABC-type antimicrobial peptide transport system,ATPase component CP001581.1.gene798.p Protein 2e-39 44
CCALI_01463 YP_008089394.1 ABC-type antimicrobial peptide transport system,ATPase component NC_012469.1.7685735. Protein 1e-35 43