Gene Information

Name : CCALI_01146 (CCALI_01146)
Accession : YP_008089089.1
Strain : Chthonomonas calidirosea T49
Genome accession: NC_021487
Putative virulence/resistance : Virulence
Product : ATPases with chaperone activity, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1337930 - 1340695 bp
Length : 2766 bp
Strand : -
Note : -

DNA sequence :
ATGGCGACAAGACTGTGCGATGTATGCGGGATTCGACCGGCCACGGTGCGGGTACGCGTTCGACGTGACGGTCGTGAAAC
CTATATGAACCTCTGTGAAGCCGACTATATGCGGTTTCGGCAGCGCGAACAACGCTCCTATTCCCCTTTCGAGTCGCTTT
TCGGTCGTGGACTGTTTGAGGAGTTCGAAGACATTCTAAGCTCCTTGCGCTCTCCAGAAGAGGGCTGGTCTCTCGGAGGG
CGAATGCCTACACCGTCTTCCGGTGAGCGCAACGCGGTGGACATCTCCCGCTATTTCAGCGAGCAGACCAAAGAGTTGTT
GCAGGAGGCCGCCGAAAAGGCTGCCGAGTGGGGCCAGTCCGAGGTGGATACAGAGCATCTGCTCTACGTGCTTGCGGATA
ATGAGGTGGCTCAGGCCATCTTTAAACAGTTCCGCATCTCCCCAGCTGATGTAAAGGGATACTTGGAGCATAACGCCCCC
CGCAACGAAAAGCCGTATGAGGGCAAGGAACTTGGCGTTTCTCCTCGCGTTAAAAGTGCCTTAGAGCAGGCCTTCATCGC
CTCCCAAGAGCTTGGCCACAGCTATGTGGGGCCGGAGCATCTGCTCATAGGGCTTCTGATGGAGCAGGATGGCATCGCAA
GTGACCTACTGCGCAAATACGGTCTAACCCCACAAGCGCTCCGTCAGCAGACGGTGAAGATTGTAGGGCAGGGCGCAGAG
GAGGGCAAGGTAGAGGCCCCCAGCAACACGCCTCATCTCGATAAGTATTCGCGTGATCTTACCCAATTGGCTCGCCAAGG
CAAGCTCGACCCCGTGATCGGCCGCTCTAAAGAGATCGAAACCACCATCGAGATCCTAGCTCGGCGCAAGAAGAACAATC
CGGTGCTCATCGGTGAGCCTGGTGTGGGGAAAACCGCTATCGTAGAGGGACTTGCGCAGCGCATCGTCAACCATGAGGTG
CCGGAGGTTTTGCGCGATAAACGCTTGGTGGAGCTGAACGTAAACTCCCTTATTGCCGGTTCGAAATACCGCGGCGAGTT
TGAGGAGCGCATCAAGCAGGTGCTCGATGAGATCACCGCGCACTCTAACGAGATCATCCTTTTCATTGATGAGCTCCATA
CCATCGTTGGTGCCGGTTCCACTTCTGGTGAGGGTGGGGTGGATATCGCCAACGTGTTTAAACCGGCGCTCGCGCGAGGC
GAACTGCATCTGATCGGCGCTACCACTCTCAACGAGTATCAGAAGTATATCGAAAAAGACGCAGCACTTGAACGACGTTT
CCAGCCGGTATTCATCGCTGAACCCACAGTAGAGCAGACCATCAACATCTTGCGTGGGCTACGCGATCGCTTCGAAGCGC
ACCACAAGGTGCGTATTACGGATGAGGCCATTGTGGCTGCGGCAGAGCTTTCCGACCGCTATATTCGCGGGCGTTATCTG
CCCGATAAAGCCATAGACCTTATTGACCAGGCTGCAGCACGCGTGCGCATCGCCTCCACGTCGCGACCGGCCGAAGTATT
GGAGCTGGAGTCTGAGCTGCAGCAGCTGAGGCGGGAGCAGGATTACGCCTCCTCTCGCAAACAGTTCGAGAAAGCGCAGG
AGCTTGGCGAGAAGATCAAACAGAAAGAGCAGGAGCTGGCGGAGCGCACGGAGCGTTGGAAGAAGGCTGTGGCCTCAGGC
TCGGTAGAGGTACGCGCAGAGCATATCGCCGAGATCATCTCGAACCTTACCGGTATTCCGGTGGCAGAACTCACGGAAGA
GGAGCGCAACAAGCTGCTTAAGCTCGAAGAGAAGCTGCACGAGAGAGTCGTTGGACAGGAGGAGGCCATTCGTGCGGTAA
GCGACGCCGTGCGTCTATCTCGAGCTGGTCTGAAAGAGGGAGGCCGTCCCATTGCTACCTTCCTCTTCTTAGGGCCCACT
GGTGTCGGAAAGACGGAGCTGGCCAAAGCATTAGCATGGGCTGTTTTCGGTGATGAGGATGCCGTTATCCGCATAGATAT
GAGTGAGTATATGGAGCGCCATACGGTTGCGCGCCTTATCGGAGCCCCTCCAGGCTACGTAGGTTACGAGGAGGGTGGCC
AGCTGACAGAGCGGGTACGGCGCCGTCCCTACAGTGTCATCTTGCTCGATGAGATCGAAAAGGCGCATCCCGATGTCTAC
AATGTGCTGCTGCAGGTGTTCGATGAAGGACGCCTTACCGACGGCAAGGGGCGCGTGGTAGACTTTACTAACACGATTAT
CATCGCCACGAGCAACCTCGGATCGGATATTATCCAGCAGAATCTCCATCTGCCCGAACACCAGCGTAAGGACTATAATC
AGCTTAAAAATGCGTTAATGGAGATACTTCGGCGCCACTTCCGACCGGAGTTCCTTAATCGCATTGATGAGGTGATCGTC
TTTCATGCGCTTACACAGGAGCAGATCAAGGACATCGTGCGATTGCAGCTTGAGCGTGTACGCCGTACGGCCCGTGGGCA
GGGAATCAACCTTCAGTTCGACGATACGCTGCTCGAACATCTCGCGGAGGTCGGCTATCAACCGGAGTTCGGCGCACGCG
AGCTGAAGCGCCGTATCCGCTCTGAAGTCGAAACGCGTGTTGCGGCAGCGCTCCTAAAGGGAGAGTTGCTAGAAGGTGAT
TCGGCACTGGTGCGCTACGACAAAGAGCACGATCAGGTCGTTATCGAGAAGATGGAGGAGGCAGTTACTCCAACGACAGA
GGCCGAGGCGACCGTTGAAGCCAATCCCTCGGAGGCAAGAGGATGA

Protein sequence :
MATRLCDVCGIRPATVRVRVRRDGRETYMNLCEADYMRFRQREQRSYSPFESLFGRGLFEEFEDILSSLRSPEEGWSLGG
RMPTPSSGERNAVDISRYFSEQTKELLQEAAEKAAEWGQSEVDTEHLLYVLADNEVAQAIFKQFRISPADVKGYLEHNAP
RNEKPYEGKELGVSPRVKSALEQAFIASQELGHSYVGPEHLLIGLLMEQDGIASDLLRKYGLTPQALRQQTVKIVGQGAE
EGKVEAPSNTPHLDKYSRDLTQLARQGKLDPVIGRSKEIETTIEILARRKKNNPVLIGEPGVGKTAIVEGLAQRIVNHEV
PEVLRDKRLVELNVNSLIAGSKYRGEFEERIKQVLDEITAHSNEIILFIDELHTIVGAGSTSGEGGVDIANVFKPALARG
ELHLIGATTLNEYQKYIEKDAALERRFQPVFIAEPTVEQTINILRGLRDRFEAHHKVRITDEAIVAAAELSDRYIRGRYL
PDKAIDLIDQAAARVRIASTSRPAEVLELESELQQLRREQDYASSRKQFEKAQELGEKIKQKEQELAERTERWKKAVASG
SVEVRAEHIAEIISNLTGIPVAELTEEERNKLLKLEEKLHERVVGQEEAIRAVSDAVRLSRAGLKEGGRPIATFLFLGPT
GVGKTELAKALAWAVFGDEDAVIRIDMSEYMERHTVARLIGAPPGYVGYEEGGQLTERVRRRPYSVILLDEIEKAHPDVY
NVLLQVFDEGRLTDGKGRVVDFTNTIIIATSNLGSDIIQQNLHLPEHQRKDYNQLKNALMEILRRHFRPEFLNRIDEVIV
FHALTQEQIKDIVRLQLERVRRTARGQGINLQFDDTLLEHLAEVGYQPEFGARELKRRIRSEVETRVAAALLKGELLEGD
SALVRYDKEHDQVVIEKMEEAVTPTTEAEATVEANPSEARG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-168 50
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-101 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CCALI_01146 YP_008089089.1 ATPases with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 53