Gene Information

Name : MSA_16520 (MSA_16520)
Accession : YP_008087388.1
Strain : Streptococcus agalactiae ILRI005
Genome accession: NC_021486
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter, periplasmic-binding protein SitA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1538015 - 1538941 bp
Length : 927 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAGTGGTTAGTTATTTTATCATGTTTTGTAGCATTTTTAGGCTTAGGTGCCTGTGCTAACAAGCAGGATCAAGC
CAAAAACGAAAAATTAAAAGTAGTTGTAACCAACTCTATTTTGGCAGATATAACAAAAAATATAGCCGGTAACAAAATCG
ACTTACATAGTATTGTACCTGTTGGTAAAGATCCTCATGAATATGAGCCGTTACCAGCAGACGTTGAAAAAACAACTCAA
GCAGACCTTGTTTTTTACAACGGAATTAATCTTGAAACAGGCGGTAATGCTTGGTTTACAAAATTAATAAAGAACGCTAA
GAAGAAAGAAAACAAAGATTACTTTGCGGTTAGCGATGGAGTTGATGTTATTTATCTAAATGGTCAAAGCGGAAAAGGTA
AAGAAGACCCACATGCTTGGTTGAACCTTGAAAATGGTATTATTTACTCAAAAAATATTGCTAAGCAATTAATTGCTAAA
GATCCAAAAAACAAAGCTACTTATGAGAAAAACAGAGATGCTTATGTAGCTAAATTAGAAAAATTGGATAAAGAAGCAAA
ATCTAAATTTAATGCCATTCCAGCTAATAAAAAATTAATTGTTACTAGTGAAGGTTGCTTTAAATATTTCTCAAAAGCTT
ATGGAGTTCCATCAGCATACATCTGGGAAATTAACACTGAAGAAGAAGGTACGCCAGATCAAATTACTAGCTTAGTTAAG
AAATTAAAACAAGTAAGACCTTCAGCTTTATTCGTTGAATCAAGTGTTGACAAGCGTCCTATGAAATCTGTTTCAAGAGA
ATCAGGTATCCCAATTTACGCAGAGATCTTCACAGACTCAATTGCTAAAAAAGGTCAAAAGGGTGACAGCTACTACGCTA
TGATGAAATGGAATCTTGATAAGATTGCAGAAGGTTTAGCAAAATAA

Protein sequence : 
MKKWLVILSCFVAFLGLGACANKQDQAKNEKLKVVVTNSILADITKNIAGNKIDLHSIVPVGKDPHEYEPLPADVEKTTQ
ADLVFYNGINLETGGNAWFTKLIKNAKKKENKDYFAVSDGVDVIYLNGQSGKGKEDPHAWLNLENGIIYSKNIAKQLIAK
DPKNKATYEKNRDAYVAKLEKLDKEAKSKFNAIPANKKLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQITSLVK
KLKQVRPSALFVESSVDKRPMKSVSRESGIPIYAEIFTDSIAKKGQKGDSYYAMMKWNLDKIAEGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 3e-103 74
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 5e-103 74

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSA_16520 YP_008087388.1 Manganese ABC transporter, periplasmic-binding protein SitA VFG1359 Protein 7e-105 76
MSA_16520 YP_008087388.1 Manganese ABC transporter, periplasmic-binding protein SitA VFG2165 Protein 3e-81 59
MSA_16520 YP_008087388.1 Manganese ABC transporter, periplasmic-binding protein SitA VFG2157 Protein 5e-75 52