Gene Information

Name : MSA_13860 (MSA_13860)
Accession : YP_008087124.1
Strain : Streptococcus agalactiae ILRI005
Genome accession: NC_021486
Putative virulence/resistance : Unknown
Product : Tn5252, relaxase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1271399 - 1272775 bp
Length : 1377 bp
Strand : -
Note : -

DNA sequence :
ATGGTAGTCACTAAACACTTTGCAACGCACGGAAAAAAATATCGTAGGCGTTTAATTAAGTATATTCTCAATCCTGATAA
AACGGACAATTTGAAATTGGTATCTGATTTTGGCATGAGCAATTATTTAGACTTCCCTAGCTATGAAGAAATGGTAGAAA
TGTACAATGTCAACTTTACTAATAATGACAAGTTGTACGAATCAAGAAATGACCGACAAGAAAAACACCAGCAAAATATT
CATGCCCATCATCTCATCCAATCATTTTCTCCTGAAGATAATCTGACACCTGAAGAAATTAACCGCATTGGTTATGAGAC
CATGATGGAATTAACAGGGGGCCGTTTTCGTTTCATCGTGGCAACTCATACAGACAAAGACCATATCCACAACCATATCC
TAATCAATTCTATAGATCAAAATTCAGATAAAAAATTGATATGGAATTATGCCTTGGAACGAAATCTCCGTATGATTTCA
GACCGCATTTCTAAAATGGCGGGGGCAAAAATTATCGAGAAGCGCTCTTCGTATCGAGATTATCAAAGATATAGGGAGTC
GAGCCATAAGTTTGAGCTGAAGCAGCGCCTTTATTTTTTGATGCATCAGTCAAAGTCCTTTGATGATTTTTTAGAAAAAG
CAGAGCAGTTACATGTTCATATTGATTTTAGTCAGAAGCACAGTCGTTTTATAATGTCAGACAGAGAGATGTCAAAACCA
ATCCGAGGCCGTCAACTTAGTAAACGAGATTTATATGATGAAGACTTTTTCCATACTCATTTTGCCAAGATAGAAATTGA
AAGTCAGCTAGAATTTCTGTTGCTCCTCGTTAATTCTTTAGAAGAGTTACTGACAAAAGCAAAAGAATTGAATCTATCCA
TTGACTTAAAACAAAAAAATGTGACCTTTACTCTTGAAGAAAATGGCAAGCAGATAAGTCTGAGTCAAAAAAAAATAAGT
GAGAAAAAGTTATATGATGTTGCTTTTTTTCAGAATTATTTTGAAGATAAGGTATTTGTTTTCTCAGAGGCAGTTGAAAG
TCTTCAAGAACAATATCATGCTTTTCACGAAGAACGTGATAAGGAGAAGGTAGCCACTGAAGAAATTGAGGAAGCCTTTG
AAGAATTTAAGAAAAAGAGAGATTCTGTTCATGAATTTGAAGTGGAGCTTGCAGAACACCAAATTGAGAAGTTAGTTGAT
GGGGGAATTTATATCAAGGTGTCTTTTGGTATTAAGCAGAGTGGTCTTGTTTTCATTCCCAACTATCAATTGGATATTAT
GGAAGAAGAGAATCAGAAAAAATATAAAGTCTATATCCGTGAGACAACCTCATACTTTATCTATAACAAAAACTATGAAT
CGGTTACACTAAACTAG

Protein sequence :
MVVTKHFATHGKKYRRRLIKYILNPDKTDNLKLVSDFGMSNYLDFPSYEEMVEMYNVNFTNNDKLYESRNDRQEKHQQNI
HAHHLIQSFSPEDNLTPEEINRIGYETMMELTGGRFRFIVATHTDKDHIHNHILINSIDQNSDKKLIWNYALERNLRMIS
DRISKMAGAKIIEKRSSYRDYQRYRESSHKFELKQRLYFLMHQSKSFDDFLEKAEQLHVHIDFSQKHSRFIMSDREMSKP
IRGRQLSKRDLYDEDFFHTHFAKIEIESQLEFLLLLVNSLEELLTKAKELNLSIDLKQKNVTFTLEENGKQISLSQKKIS
EKKLYDVAFFQNYFEDKVFVFSEAVESLQEQYHAFHEERDKEKVATEEIEEAFEEFKKKRDSVHEFEVELAEHQIEKLVD
GGIYIKVSFGIKQSGLVFIPNYQLDIMEEENQKKYKVYIRETTSYFIYNKNYESVTLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1098 YP_006309900.1 relaxase Not tested FWisland_1 Protein 1e-168 85
SSU05_0913 YP_001198279.1 chromosome segregation ATPase Not tested 89K Protein 2e-138 66
SSU98_0919 YP_001200477.1 chromosome segregation ATPase Not tested 89K Protein 3e-136 65
SP_1056 NP_345530.1 Tn5252, relaxase Not tested PPI-1 Protein 1e-114 59