Gene Information

Name : BSA_16850 (BSA_16850)
Accession : YP_008085332.1
Strain : Streptococcus agalactiae 09mas018883
Genome accession: NC_021485
Putative virulence/resistance : Virulence
Product : Response regulator CsrR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1646774 - 1647463 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGGGTAAAAAGATCTTAATAATCGAAGATGAGAAAAATTTAGCTCGCTTCGTCTCGTTAGAACTACTACATGAAGGATA
TGATGTTGTTGTTGAAACAAACGGTCGTGAAGGATTGGACACAGCATTAGAAAAAGATTTTGATTTGATTCTACTGGATT
TAATGCTTCCAGAGATGGATGGTTTCGAAATCACACGTCGCCTGCAGGCTGAAAAAACAACCTATATCATGATGATGACA
GCACGTGATTCTGTTATGGATATTGTAGCTGGTCTTGATCGTGGAGCAGATGATTATATTGTTAAGCCGTTTGCAATCGA
AGAATTATTAGCACGTGTTAGAGCGATTTTCCGACGCCAAGAAATTGAAACGAAGACAAAAGAAAAAGGTGATAGTGGTA
GTTTCCGTGATTTGTCATTAAATACTCATAATCGTTCAGCGATGCGTGGTGATGAGGAAATTTCACTAACAAAACGTGAA
TTTGATTTGTTGAATGTCTTGATGACAAATATGAATCGTGTTATGACACGAGAAGAGTTGCTAGAACATGTTTGGAAATA
CGATGTGGCAGCAGAGACAAACGTTGTTGATGTTTATATCCGTTACCTAAGAGGTAAAATTGATATCCCAGGTCGTGAAT
CATATATTCAAACTGTTCGCGGAATGGGCTATGTGATTCGTGAAAAATAA

Protein sequence : 
MGKKILIIEDEKNLARFVSLELLHEGYDVVVETNGREGLDTALEKDFDLILLDLMLPEMDGFEITRRLQAEKTTYIMMMT
ARDSVMDIVAGLDRGADDYIVKPFAIEELLARVRAIFRRQEIETKTKEKGDSGSFRDLSLNTHNRSAMRGDEEISLTKRE
FDLLNVLMTNMNRVMTREELLEHVWKYDVAAETNVVDVYIRYLRGKIDIPGRESYIQTVRGMGYVIREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-36 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BSA_16850 YP_008085332.1 Response regulator CsrR HE999704.1.gene1528. Protein 1e-56 59
BSA_16850 YP_008085332.1 Response regulator CsrR AE015929.1.gene1106. Protein 1e-48 54
BSA_16850 YP_008085332.1 Response regulator CsrR NC_002758.1121390.p0 Protein 3e-51 53
BSA_16850 YP_008085332.1 Response regulator CsrR NC_010079.5776364.p0 Protein 3e-51 53
BSA_16850 YP_008085332.1 Response regulator CsrR NC_002952.2859858.p0 Protein 3e-51 53
BSA_16850 YP_008085332.1 Response regulator CsrR NC_007622.3794948.p0 Protein 3e-51 53
BSA_16850 YP_008085332.1 Response regulator CsrR NC_003923.1003417.p0 Protein 3e-51 53
BSA_16850 YP_008085332.1 Response regulator CsrR NC_013450.8614146.p0 Protein 3e-51 53
BSA_16850 YP_008085332.1 Response regulator CsrR NC_002951.3238224.p0 Protein 3e-51 53
BSA_16850 YP_008085332.1 Response regulator CsrR NC_007793.3914065.p0 Protein 3e-51 53
BSA_16850 YP_008085332.1 Response regulator CsrR NC_012469.1.7685629. Protein 9e-40 43
BSA_16850 YP_008085332.1 Response regulator CsrR BAC0125 Protein 1e-36 42
BSA_16850 YP_008085332.1 Response regulator CsrR AE016830.1.gene1681. Protein 6e-41 41
BSA_16850 YP_008085332.1 Response regulator CsrR BAC0197 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BSA_16850 YP_008085332.1 Response regulator CsrR VFG1390 Protein 2e-41 44
BSA_16850 YP_008085332.1 Response regulator CsrR VFG0596 Protein 3e-36 43
BSA_16850 YP_008085332.1 Response regulator CsrR VFG1389 Protein 3e-37 43