Gene Information

Name : lysS (BaLi_c00980)
Accession : YP_008076266.1
Strain : Bacillus licheniformis 9945A
Genome accession: NC_021362
Putative virulence/resistance : Virulence
Product : lysyl-tRNA ligase LysS
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 92987 - 94489 bp
Length : 1503 bp
Strand : +
Note : -

DNA sequence :
ATGATGAGTCATGAAGAGCATAACCATGAAGAATTAAACGACCAGCTGCAAGTCAGACGCGATAAAATGAATCAATTGAG
AGAAAACGGGAAAGATCCTTTCGGGCAGCGTTTTGACCGCACCCATCAATCAACTGATCTCATTGAATCATATAATGAAT
TCTCAAAAGAAGAATTAGAGGAAAAAGCAATTGAAGTGACGATTGCCGGCCGGATGATGACAAAGCGTGGAAAAGGAAAA
GCGGGATTCGCGCACATTCAGGATTTAAAGGGCCAGATTCAGATCTATGTCAGGAAAGACAGTGTCGGTGAAGAGCAGTA
CGAATGGTTTAAAAGCTCTGACCTCGGGGACATTGTCGGCGTTACAGGCGTCATGTTTAAAACGAATGTTGGCGAATTGT
CTGTCAAAGCTACATCCTTTGATTTATTAACAAAAGCACTTCGTCCGCTTCCGGACAAATATCACGGATTAAAAGACATC
GAACAGCGCTACCGTCAGCGTTATTTGGACTTGATCGTAAACCCGGAAAGCAAAAATACGTTTATTACGCGCAGCAAAAT
CATTCAATCGATGAGAAGATACTTAGATGACCACGGATACTTAGAAGTTGAGACGCCTACGATGCACGCGATTCCGGGCG
GAGCGTCTGCCCGTCCGTTCATTACGCATCATAATGCGCTTGATATGCCGCTTTACATGAGGATCGCTATCGAGCTCCAT
TTGAAAAGGCTGATTGTCGGCGGATTGGAAAAAGTCTATGAAATCGGACGTGTATTCAGAAATGAAGGAGTTTCCACACG
GCACAATCCTGAATTTACGATGATCGAACTTTACGAAGCTTATGCTGACTATAAAGATATTATGAGCTTGACGGAAAACC
TTATCGCTCATATTGCACAAGAAGTGCTTGGCACTACAACCGTTCAATACGGAGATTATGAAGTTGACCTCAAGCCTGAA
TGGAAGAGACTTCATATGGTCGATGCTGTTAAAGAAGCCACCGGTGTAGACTTCTGGAAAGAAGTATCGGTAGAAGAAGC
AAGAGCATTCGCGAAAGAACACGGAATTGAAATTTCTGAAAGCATGTCAGTAGGACATATCATTAATGAGTTCTTCGAGC
AAAAAGTTGAAGAAACGTTGATTCAGCCTACTTTTATATACGGACACCCTGTGGAGATTTCTCCGCTTGCTAAGAAAAAC
CCTGAAGACCCTCGATTTACAGACCGTTTTGAGCTGTTTATCGTCGGCCGTGAACACGCGAATGCATTTACTGAATTAAA
TGATCCTATCGACCAAAAAGAACGCTTTGAAGCTCAATTAAAAGAACGTGAAGAAGGAAACGATGAAGCGCATATGATGG
ATGAAGACTTTGTCGAAGCACTGGAGTACGGAATGCCTCCTACCGGCGGTCTTGGAATCGGCATTGACAGACTGATTATG
CTTTTGACGAATTCTCCTTCAATCAGGGACGTTTTACTATTCCCGCAAATGAGACATCGTTAA

Protein sequence :
MMSHEEHNHEELNDQLQVRRDKMNQLRENGKDPFGQRFDRTHQSTDLIESYNEFSKEELEEKAIEVTIAGRMMTKRGKGK
AGFAHIQDLKGQIQIYVRKDSVGEEQYEWFKSSDLGDIVGVTGVMFKTNVGELSVKATSFDLLTKALRPLPDKYHGLKDI
EQRYRQRYLDLIVNPESKNTFITRSKIIQSMRRYLDDHGYLEVETPTMHAIPGGASARPFITHHNALDMPLYMRIAIELH
LKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLIAHIAQEVLGTTTVQYGDYEVDLKPE
WKRLHMVDAVKEATGVDFWKEVSVEEARAFAKEHGIEISESMSVGHIINEFFEQKVEETLIQPTFIYGHPVEISPLAKKN
PEDPRFTDRFELFIVGREHANAFTELNDPIDQKERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLIM
LLTNSPSIRDVLLFPQMRHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-126 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_008076266.1 lysyl-tRNA ligase LysS VFG1668 Protein 1e-126 53