Gene Information

Name : epsC (BaLi_c36980)
Accession : YP_008079750.1
Strain : Bacillus licheniformis 9945A
Genome accession: NC_021362
Putative virulence/resistance : Virulence
Product : putative UDP-sugar epimerase EpsC
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.-
Position : 3680455 - 3682272 bp
Length : 1818 bp
Strand : -
Note : polysaccharide biosynthesis protein

DNA sequence :
TTGACATATCGGAGAAGGCTTTCCATTATTACCGCACTCGATTCGTACTTGGTTTTGCTGTCCATCTTTATCGGATATCA
GCTGATTTCGCCATCATATGATTTATACCCTTCGGAAATGCTGCTGATGACTTCACTGATACTGCTTGGCGCTCAGCATT
TATTCGCCCATTGCTTCCACCTTTACAAAAAAGTGTGGGAGTACGCAAGCATCGGTGAATTATATGTGCTGCTTAAATCG
ATTACCTTGTCCCATCTTGTGACGGCGGTCCTCGAACTGTTTTTCTTTCAAAACGTTCCGGTTCGCCTTTTATGTTTAAG
CTGGCTGTTCCAGCTGATCTTGATCGGCGGGTCGCGGATGATGTGGCGCATCATCAGGGAACAGGTGAACAAAGAAAGCA
AAGGATCTTTAAAAGCGCTGATTATCGGAGCCGGCTCTGCCGGCAGTTTGATCGCAAAACAGCTTGTGCAAAAGCCGGAA
TTGAACATTAAGCCTGTCGCATTTATCGATGATGACAAAACGAAATACCGGCTTGAAATCATGGGTTTGCCCGTTTTAGG
CGGAAAAGAGCAGATCATGCAGGCGGTCCGGCAGTGGAATATTGACCGGATCATCATCGCCATTCCATCTTTAAGCGTCA
CTCAGATGCAGGACATGTACAAGGCGTGTGCGCAAACGGGGATCAAAACGCAAATCATGCCGAAAATAGACGAAATTTTG
CTCGGCAGACATCCTGTCGGCCAGCTTCGCGATGTCAAAGCGGAAGATTTGCTCGGAAGGGAGCCTGTCCAGCTTGATAC
AAGCGAAATCTCCAATACGGTCAAGGACCGCGTCGTTCTTGTGACGGGAGCCGGAGGTTCAATCGGCTCGGAAATCTGCC
GGCAAATCAGCAAATTTAAACCGAAATCGATTGTTTTAGTCGGGCACGGAGAAAACAGCATTCATTCGATTCTGCTGGAA
CTGGAGGAGAAGTTCGGAAAGCATGTCGCCTATTATCCGGAAATCGCCGACATACAGGACAGAGAGAAAATGTTTTTGCT
GATGGAACGCTACAAACCGAATGTCATTTATCATGCAGCTGCACACAAGCATGTGCCGCTGATGGAAAAATGCCCGAAAG
AAGCTGTCAAAAACAATATTCTCGGTACGAAAAACGTCGCTGAAGCCGCCGACGAAACCGGAGTGGAAACTTTTGTCCTG
ATCTCGTCAGACAAAGCGGTCAACCCTGCCAATATCATGGGGGCGACGAAGCGGTTCGCAGAAATGCTGATCATGAATCT
CGGCAAAACGAGCAAAACCAAATTTGTCGCCGTCCGCTTCGGAAATGTTCTCGGCAGCAGGGGAAGCGTCATTCCGATTT
TCAAAAAACAAATCGCTAAAGGCGGTCCGGTCACTGTCACACACCAGGACATGACGAGGTACTTCATGACGATTCCGGAA
GCTTCAAGGCTGGTTATTCAAGCGGGGGCGCTTGCCAAAGGAAGACAGATTTTCGTGCTCGATATGGGCGAACCGGTCAA
AATCGTCGATCTCGCCAAAAATCTCATCCAGCTCTCCGGCTATACGACAGACCAGATCAAAATTGAATTTACAGGTATCC
GCCCGGGAGAAAAAATGTACGAAGAGCTGCTGAATCAAAATGAAGTGCTGGCAGAGCAGGTTTTTCCGAAGATTCATATC
GGCAAGGCGGTCGACGTCGAGTTGACGGTGCTGAAGACATTCATGGAGGAATTTATGTATTTGTCAGACCGCGAGCTGAG
AGAACGCTTGTTCCAAGCGATCGGCCAGCATGAGAAAAAGCTGGTGACAGCGCACTAG

Protein sequence :
MTYRRRLSIITALDSYLVLLSIFIGYQLISPSYDLYPSEMLLMTSLILLGAQHLFAHCFHLYKKVWEYASIGELYVLLKS
ITLSHLVTAVLELFFFQNVPVRLLCLSWLFQLILIGGSRMMWRIIREQVNKESKGSLKALIIGAGSAGSLIAKQLVQKPE
LNIKPVAFIDDDKTKYRLEIMGLPVLGGKEQIMQAVRQWNIDRIIIAIPSLSVTQMQDMYKACAQTGIKTQIMPKIDEIL
LGRHPVGQLRDVKAEDLLGREPVQLDTSEISNTVKDRVVLVTGAGGSIGSEICRQISKFKPKSIVLVGHGENSIHSILLE
LEEKFGKHVAYYPEIADIQDREKMFLLMERYKPNVIYHAAAHKHVPLMEKCPKEAVKNNILGTKNVAEAADETGVETFVL
ISSDKAVNPANIMGATKRFAEMLIMNLGKTSKTKFVAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHQDMTRYFMTIPE
ASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIQLSGYTTDQIKIEFTGIRPGEKMYEELLNQNEVLAEQVFPKIHI
GKAVDVELTVLKTFMEEFMYLSDRELRERLFQAIGQHEKKLVTAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 1e-133 53
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-134 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epsC YP_008079750.1 putative UDP-sugar epimerase EpsC VFG1300 Protein 3e-133 54
epsC YP_008079750.1 putative UDP-sugar epimerase EpsC VFG0029 Protein 4e-75 41