Gene Information

Name : clpE (BaLi_c16050)
Accession : YP_008077710.1
Strain : Bacillus licheniformis 9945A
Genome accession: NC_021362
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ClpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1570357 - 1572453 bp
Length : 2097 bp
Strand : -
Note : class III stressgene

DNA sequence :
ATGCGTTGTCAACATTGTCAAAAAAATGAGGCGACGATTCGCCTGAACATGCAAATCAACTTTACAAAAAAACAAATGGA
TTTATGTGAAGACTGCTATAAAGAGCTGACTCAGCCTTCTATGTTTTCAGGAAATCATTTTTTGGGCGGCGGAGGTTCTT
TCTTCAGCCAGCCATCACAAGCGCAGACGCAAACCGCTGCCAAAAAAGGCTTGCTCGATGAACTTGCCGTCAATTTAACG
AATGCCGCAAAGACAGGCTTGCTCGATCCGGTGATCGGCCGCGATGATGAAGTGGCCCGTGTGATCGAAATCTTAAACCG
CAGAAATAAAAACAACCCTGTCTTAATCGGTGAACCGGGCGTCGGTAAAACGGCCGTCGCTGAAGGACTTGCTCTCAAAA
TCGCCGAAGGCGATGTTCCAAATAAATTGAAAAACAAAGAACTTTACCTGCTTGATGTCGCTTCCCTCGTAGCAAACACC
GGCATCAGAGGACAATTTGAAGAAAGAATGAAACAGCTGATGAAAGAGCTGAAAGAACGCAAAAACGCGGTCTTGTTTAT
TGACGAAATTCACCTTCTTGTCGGAGCAGGCTCTGCCGAAGGCTCCATGGACGCCGGCAACATTTTAAAACCTGCGCTTG
CCAGAGGCGAACTGCAAGTCATCGGCGCGACGACGTTGAAAGAATATCGCCAAATCGAAAAAGATGCAGCATTAGAGCGG
CGCTTCCAGCCGATCATGGTGCATGAACCGACAATTGAGCAGACCGCGGCGATTTTAAACGGGCTGAAAGAAAAATACGA
AGCGTATCATGATGTAACTTACACGGATGAAGCGATCAAAGCCTGCGTCGTTCTGTCTAGCCGCTATATTCAGGACCGTC
ATCTTCCCGATAAGGCGATCGACCTTTTGGATGAAGCCGGTTCAAAAGCGAACTTGAAAATCGACACGGTCAGCGGTGAA
CAAGCTTCCCAACGCCTGAAAGAAATCGAAGCGGAAAAAGCTAAAGCGCTGCAGGAAGAAAACTATGAGCTTGCAGCAAA
GCTCCGCGATGAAGAAGAAGCACTGCACAAAAAAATGGAAAACCATGCGGAAGAAAAACGGGCAACCGTTAAAGCTGAAG
ACATTCAAGCGATCATCGAACAAAAAACCGGCATTCCGGTCGGCAAGCTTCAGCACGACGATCAGAAGAAAATGAAAGAG
CTTGAAGCAAACCTTTCAAGCCGCGTGATCGGTCAAAAAGAAGCGGTAAAAAAAGTGGCAAAAGCCGTCAAAAGAAGCCG
CGCCGGCCTGAAATCAAAAAACAGGCCAGTCGGTTCATTCCTGTTCGTCGGCCCGACAGGTGTCGGTAAAACAGAACTTT
CTAAAAGGCTTGCGGAAGAACTGTTCGGCACGAAGGATGCCGTCATCCGCCTCGATATGAGCGAATACATGGAAAAACAC
GCCGTATCGAAGCTGATCGGTTCACCTCCTGGATATGTCGGCCACGAAGAAGCCGGACAGCTCACCGAAAAAGTCCGGAG
GAACCCGTACAGCATCGTTTTGCTTGATGAAATCGAAAAAGCCCATCCCGATGTTCAGCACATGTTCCTGCAAATCATGG
AAGACGGACGTCTGACAGACAGCCAGGGACGGACGGTCAGCTTTAAAGATACCGTCATCATTATGACAAGCAATGCCGGA
GTATCTGAAAAGCGGACAACCGTCGGTTTTAACCGGGAAGAACAAGTAATGGGCGAACAATCAATGATCGATTCCCTAAG
CAGCTACTTTAAGCCGGAATTCCTGAACAGATTTGACAGCATCATCGAGTTCCAGCCGCTCGAAAAAGAAGATCTGGTCA
AGATCGTCACTCTCTTGCTGGAAGAGCTTGAAGAAACGTTAAAAGAGCAAAACATGACGCTTGAAGTTTCAGATGAAGCA
AAAGAAAAAATTGCTGAAATCGGATACCATCCGGCCTTCGGCGCCCGCCCATTAAGACGAACCATTCAAACAGCAGTCGA
AGATCAAATGACCGATCTGCTGCTTGAAGAAGAACATATCAACGGTTTTGCGGTTATCGTTGAAAACGATGAAATCTTGG
TGAAACCAACCGCATAA

Protein sequence :
MRCQHCQKNEATIRLNMQINFTKKQMDLCEDCYKELTQPSMFSGNHFLGGGGSFFSQPSQAQTQTAAKKGLLDELAVNLT
NAAKTGLLDPVIGRDDEVARVIEILNRRNKNNPVLIGEPGVGKTAVAEGLALKIAEGDVPNKLKNKELYLLDVASLVANT
GIRGQFEERMKQLMKELKERKNAVLFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALER
RFQPIMVHEPTIEQTAAILNGLKEKYEAYHDVTYTDEAIKACVVLSSRYIQDRHLPDKAIDLLDEAGSKANLKIDTVSGE
QASQRLKEIEAEKAKALQEENYELAAKLRDEEEALHKKMENHAEEKRATVKAEDIQAIIEQKTGIPVGKLQHDDQKKMKE
LEANLSSRVIGQKEAVKKVAKAVKRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKRLAEELFGTKDAVIRLDMSEYMEKH
AVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSNAG
VSEKRTTVGFNREEQVMGEQSMIDSLSSYFKPEFLNRFDSIIEFQPLEKEDLVKIVTLLLEELEETLKEQNMTLEVSDEA
KEKIAEIGYHPAFGARPLRRTIQTAVEDQMTDLLLEEEHINGFAVIVENDEILVKPTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-149 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_008077710.1 ATP-dependent Clp protease ClpE VFG0080 Protein 0.0 62
clpE YP_008077710.1 ATP-dependent Clp protease ClpE VFG0079 Protein 2e-155 54