Gene Information

Name : pdxS (Abm4_0904)
Accession : YP_008075235.1
Strain : Methanobrevibacter sp. AbM4
Genome accession: NC_021355
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1130242 - 1131123 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence :
ATGCAAAAAGGTACTGATGTATTAAAAGAAGGTTTCGCTAAAATGACAAAAGGCGGAGTCATTATGGATGTTGTAAATGC
AGAACAAGCAGGTATTGCAGAAGATGCTGGTGCTGTAGCTGTTATGGCTTTAGAAAAAGTTCCTGCAGATATCCGTAAAG
CTGGTGGAGTAGCTAGAATGGCTGATCCATCCATTACTGAAGAAGTAGTTGATGCTGTTTCCATTCCTGTCATGGCTAAA
TGTAGAATTGGTCATATTGCAGAAGCTCAAATACTCGAAACTTTAGGCGTAGACATGATTGATGAGAGTGAAGTACTTAC
ACCTGCCGATGATGTTTATCATATTAATAAGAAAGAATTCACCATTCCATTTGTATGTGGTGCTAGAAACTTAGGTGAAG
CATTAAGAAGAATTGATGAAGGTGCTGCAATGATTCGTACCAAAGGTGAACCTGGTACTGGAAACATTGTTGAAGCTGTT
CGTCATATGAGAATGGTTATGGGTGAAATCAGAACTGTTCAAGGTTTGGATGAAGAGGAAATTTGGAGATATGCAAGGGA
TATCGAAGCACCGATTGAACTCGTTCGTGAAACTGCAAAACTTGGTAAATTACCTGTAGTTAACTTTGCTGCTGGAGGTA
TTGCTACCCCTGCAGACGCTTCATTAATGATGCAATTAGGATCAGATGGAATCTTTGTAGGTTCAGGAATCTTCAAATCC
AATAATCCTCCTGCATTTGCACATGCTATTGTGGAAGCTACCGCAAACTATGATAAACCTGATGTTTTAGCTGAGGTTTC
TAAAAACTTAGGTGAAGCAATGAAAGGTTTAGACATGTCTACTTTATCCCAAGAAGACAGAATGCAAGATAGAGGTATTT
AG

Protein sequence :
MQKGTDVLKEGFAKMTKGGVIMDVVNAEQAGIAEDAGAVAVMALEKVPADIRKAGGVARMADPSITEEVVDAVSIPVMAK
CRIGHIAEAQILETLGVDMIDESEVLTPADDVYHINKKEFTIPFVCGARNLGEALRRIDEGAAMIRTKGEPGTGNIVEAV
RHMRMVMGEIRTVQGLDEEEIWRYARDIEAPIELVRETAKLGKLPVVNFAAGGIATPADASLMMQLGSDGIFVGSGIFKS
NNPPAFAHAIVEATANYDKPDVLAEVSKNLGEAMKGLDMSTLSQEDRMQDRGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-84 65
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-85 65
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-84 65