Gene Information

Name : hsdM2 (Abm4_0520)
Accession : YP_008074865.1
Strain : Methanobrevibacter sp. AbM4
Genome accession: NC_021355
Putative virulence/resistance : Unknown
Product : type I restriction-modification system M subunit HsdM2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 623812 - 625347 bp
Length : 1536 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAGTCAAGAATTAGAAAGTAAACTTTGGGCAATTGCAGATGAATTAAGAGGAAATATGGATGCTAATGAATTTAA
AAATTACATATTGGGATTTATATTTTACAGATACCTCTCTGAAAAATTAGAAATTCACATGAACAAAGAATTAGAAGTAG
ATGGTATCACTTTTAAAGAAGCATGGGAACGTGATGACTATAAGGAAGATTTGAAAGATGAAGGAATAGATTCATTAGGA
TACTTTATTGAACCTCAACATTTATTTAGTTGCATTATTAAAAAAGCTAAAGTTGGAGATTTCATATTGGATGATCTTAA
TAAAGCATTAAATTATATTAGTAATTCCTGTATTGGTACTGAAAGTCAAGATGATTTCAGCAATCTTTTTGAGGATGTGG
ATCTTCATTCATCTAAACTTGGAAGAACAAATGATGATAAAAATAAGTTAATATCAAAAATATTACTCCATTTAAATGAT
ATTGATTTTGAACTTGAAAATAGTGAATCAGATATTCTTGGTGATGCATATGAATACTTGATAAGTCAATTTGCATCTAG
TGCAGGTAAAAAAGCAGGGGAATTTTACACTCCGCAAGAGGTTTCAAAAGTACTTGCTAAAATCGTGACATTAGGTAAAA
AACGTATTAAATCAGTATATGATCCAACATGTGGTTCTGGTTCATTACTTCTACGTGTATCTAAAGAAGCTGATGTAGCA
AACTTCTATGGACAAGAATTAAATCAAACAACATATAACCTTGCACGTATGAATATGATTCTTCATGGTGTTAAATATCA
AGACTTTGATATAAAACAAGGAGATTCTTTAGAACATCCAATGCATAAAAATATGAAATTCGAAGCAATCGTTGCTAATC
CACCATTTAGTGCAAAATGGAGTGCAGATAAAACATTCCTTGATGATGAACGTTTCAGTGCATATGGAAAATTAGCACCT
AAATCTAAAGCAGACTATGCATTTGTACAACATATGATATATCATTTAGATGAAAATGGTACAATGGGTATTGTACTTCC
ACATGGAGTATTATTTAGAGGAGCTGCAGAAAGTAAAATACGCAGATATTTAATTGAAGAAAAAAACTATTTAGATGCGG
TAATTGGTCTACCTGCAAATATCTTTTATGGTACAAGTATTCCAACATGTATATTAGTATTTAAAAAATGTAGAACAGAA
GATGAGGATATACTCTTTATAGATGCATCACAAGAATTTGAAAAAGTCAAAAATCAAAATAAACTAAGAAAACAAGATAT
TGATAAAATAGTAAACACTTATGCTAAACGTGAAGAAATTGATAAGTATTCACACAAAGCAACAATGGAAGAAATAGAAG
AGAATGATTACAATCTCAATATACCAAGATATGTAGATACTTTTGAAGAAGAAGAACCTATTGATCTTGATGAAGTTTGT
AAAGAACTTAAAGAAATTTCAATTAAAGAAGCTGAAGTAGATAAAGAAATTAATAAAATATGTGAAGAACTTGGAATTCA
ATCACCAATATTTTAA

Protein sequence :
MASQELESKLWAIADELRGNMDANEFKNYILGFIFYRYLSEKLEIHMNKELEVDGITFKEAWERDDYKEDLKDEGIDSLG
YFIEPQHLFSCIIKKAKVGDFILDDLNKALNYISNSCIGTESQDDFSNLFEDVDLHSSKLGRTNDDKNKLISKILLHLND
IDFELENSESDILGDAYEYLISQFASSAGKKAGEFYTPQEVSKVLAKIVTLGKKRIKSVYDPTCGSGSLLLRVSKEADVA
NFYGQELNQTTYNLARMNMILHGVKYQDFDIKQGDSLEHPMHKNMKFEAIVANPPFSAKWSADKTFLDDERFSAYGKLAP
KSKADYAFVQHMIYHLDENGTMGIVLPHGVLFRGAAESKIRRYLIEEKNYLDAVIGLPANIFYGTSIPTCILVFKKCRTE
DEDILFIDASQEFEKVKNQNKLRKQDIDKIVNTYAKREEIDKYSHKATMEEIEENDYNLNIPRYVDTFEEEEPIDLDEVC
KELKEISIKEAEVDKEINKICEELGIQSPIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 6e-163 63
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 7e-164 63
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 7e-164 62
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 2e-163 62
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 8e-163 62
ORF6 BAC22943.1 - Not tested etd PI Protein 2e-163 62
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 2e-163 62
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 2e-163 62
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 2e-163 62
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 2e-163 62
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 6e-161 62
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 1e-163 62
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 2e-163 62
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 7e-162 62
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-163 62
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 2e-163 62
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 9e-163 62
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 2e-163 62
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 8e-163 62
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 3e-163 62
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 3e-163 62
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 3e-163 62