Gene Information

Name : Abm4_1628 (Abm4_1628)
Accession : YP_008075935.1
Strain : Methanobrevibacter sp. AbM4
Genome accession: NC_021355
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1872299 - 1873795 bp
Length : 1497 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAAAGATTCCTAATAACCCTGCACAGGAAAAGTATCAATTATATATAAATGGACAATGGAAAGATGCATCAGATGG
CTCAACCTTTGAAACTTTTTGTCCTGCAAATGGTGAAAAACTAGCTACATGTGCTGAAGCTACTAACGCAGATGTGGATG
AGGCAGTTGATGCTGCTAATGCCGCATTTCCAGATTGGAAAGATGTTGAACCTATTGAAAGAGAAGAAATTCTACTTAAG
GTTGCAGATATTATTGACGACAATGCTGATAAATTAGCTATGATTGAAACACTTGATAATGGTAAGCCAATTAGGGAGAA
TATGGCTATAGACATGCCGTTTTCATCAGATCACTTCCGTTACTTTGCTGGTGCTGTACGTGCTGAGGAAGGTTCTGCAA
CAATGTTGGACAATAATACCTTAAGCTTAATCTTAAGGGAACCAATAGGTGTAGTTGGTCAAATTGTTCCTTGGAACTTC
CCATTCTTAATGGCTGCTTGGAAATTAGCTCCAGTGCTTGCTGCAGGATGTTGTACTGTATTCCACCCATCAAGTTCCAC
TCCTTTAAGTGTACTCGAATTTGCTAAAATGACTGAAAAAGTTATTCCTAAAGGTGTATTTAATGTTATTACTGGTAAAG
GTTCAAAATCAGGTCAATACATGTTAGAACATCCGGGATTCAGAAAATTAGCATTTACCGGTTCCACTGAAATAGGTTGT
AATGTAGCAAACTGTGCTGCATCAAGATTAATTCCATCAACCTTAGAATTAGGAGGTAAATCTGCTAACATTTACTTTGA
TGATTGTAAATGGGATATGGCAATGGACGGTTTACAATTAGGTATTTTATTTAACCAGGGTCAAGTATGTTGTGCAGGTT
CCCGTGTATTTGTCCAAGAAGATATTTACGATAAGTTTGTTAAGGAAGCTGTAGATCAATTTGGTAAAATAAATGTAAAT
ATGCCATGGTTAGAGGATACACAGATGGGTTCTCAGATTAATGAGAGGCAAGTTGAAAAAATTGAAAAATGTGTTCAAGA
TGGTGTGAAAGAAGGTGCAACAATTGCTGTTGGTGGTGAAAGATTTAAAGAGGGACCACTTTCAGAAGGTAGTTTCTTTA
AACCTACATTATTAACCAATGTTACTAATGATATGAAAGTAGCACAAGAGGAAATTTTTGGACCTGTAGCTGTTGTCATT
CCATTTAAAGATGAAGAAGATGTAATTGAAATGGCTAATGACAGTTCATATGGTTTAGGTGGTGCTGTTTGGACTAGAGA
TATTAACCGTGCTATCAGTGTATGTAATGCTATTGAAACAGGTCGTATGTGGGTAAACACTTATAATTCAATTCCTGCTG
GTGCTCCATTTGGTGGTTATAAACAATCAGGTATTGGTCGTGAAACTCATAAGGTTATATTGGAACATTATACACAGATG
AAAAATATAATGATTAATCTATCTGAGCAACCAAGTGGTTTCTATCCAAAGAAATAG

Protein sequence : 
MEKIPNNPAQEKYQLYINGQWKDASDGSTFETFCPANGEKLATCAEATNADVDEAVDAANAAFPDWKDVEPIEREEILLK
VADIIDDNADKLAMIETLDNGKPIRENMAIDMPFSSDHFRYFAGAVRAEEGSATMLDNNTLSLILREPIGVVGQIVPWNF
PFLMAAWKLAPVLAAGCCTVFHPSSSTPLSVLEFAKMTEKVIPKGVFNVITGKGSKSGQYMLEHPGFRKLAFTGSTEIGC
NVANCAASRLIPSTLELGGKSANIYFDDCKWDMAMDGLQLGILFNQGQVCCAGSRVFVQEDIYDKFVKEAVDQFGKINVN
MPWLEDTQMGSQINERQVEKIEKCVQDGVKEGATIAVGGERFKEGPLSEGSFFKPTLLTNVTNDMKVAQEEIFGPVAVVI
PFKDEEDVIEMANDSSYGLGGAVWTRDINRAISVCNAIETGRMWVNTYNSIPAGAPFGGYKQSGIGRETHKVILEHYTQM
KNIMINLSEQPSGFYPKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-98 50
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-102 48
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-102 48
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-102 48
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-102 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Abm4_1628 YP_008075935.1 aldehyde dehydrogenase family protein VFG0082 Protein 6e-99 50