Gene Information

Name : C629_04140 (C629_04140)
Accession : YP_008068568.1
Strain : Corynebacterium glutamicum SCgG2
Genome accession: NC_021352
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 885096 - 885905 bp
Length : 810 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence :
GTGACCACCAACCATCAACTATCCGCCGAAGAAATTTCCCTGGCGTACGGCGAGCGCACCATCATTGATTCGCTCAGCGT
CGACATCGTCCCCGGCAAAATCACCTCCATCGTCGGCCCCAACGGATGCGGCAAATCAACGCTGCTGCGCGCCTTTGCGC
GCCTCCTTAAACCTAGCGCCGGGCAAGCGCTTATCGACGCCCACCCCCTTCATTCACTGCCAGGCAAAGAACTAGCTCGC
ATGCTCGGGCTGTTACCGCAATCCCCCACCGCACCTGAAGGCATCGTCGTCGCCGACCTCGTGGGCCGCGGCCGCCACCC
CCACCAAGGACTCATGGGCAGATGGTCCACACGCGACTACGAAGTAGTGGCCCAAGCATTGGAAATGACCAACACCACCG
AGCTTGCCGAACGCCCCATCGACGAACTCTCCGGCGGCCAACGCCAACGCGTCTGGATCGCCATGGCCCTTGCCCAAGAA
ACAGACATCCTGCTTCTTGATGAACCCACCACCTACCTCGACATCGCCAACCAGCTCGAAGTGCTTGATCTCCTCACTGA
CCTCAACCACAACCACGGCACCACCATCGTCATGGTGCTCCACGAATTGGGACTTGCCGCACGTTACTCTGACCACCTCA
TCGCCATGCACGAAGGCCACATCCATACCCAGGGCAGCCCATCAGAGGTGGTAACCGAAGCCATGATGAGCGAGGTCTTC
CACACTGACGCCCGCATCATCGCCGACCCCGTCTCCGGCGCACCACTGGTCATGCCCATGGGACGACACCACATCACCGC
ACTTCACTAG

Protein sequence :
MTTNHQLSAEEISLAYGERTIIDSLSVDIVPGKITSIVGPNGCGKSTLLRAFARLLKPSAGQALIDAHPLHSLPGKELAR
MLGLLPQSPTAPEGIVVADLVGRGRHPHQGLMGRWSTRDYEVVAQALEMTNTTELAERPIDELSGGQRQRVWIAMALAQE
TDILLLDEPTTYLDIANQLEVLDLLTDLNHNHGTTIVMVLHELGLAARYSDHLIAMHEGHIHTQGSPSEVVTEAMMSEVF
HTDARIIADPVSGAPLVMPMGRHHITALH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-68 52
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-67 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-67 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-57 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-58 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-58 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-58 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-58 46
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-51 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-51 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-51 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-51 41
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-49 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C629_04140 YP_008068568.1 hypothetical protein BAC0164 Protein 1e-57 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C629_04140 YP_008068568.1 hypothetical protein VFG0925 Protein 4e-69 50
C629_04140 YP_008068568.1 hypothetical protein VFG1042 Protein 1e-57 47