Gene Information

Name : C629_11980 (C629_11980)
Accession : YP_008070118.1
Strain : Corynebacterium glutamicum SCgG2
Genome accession: NC_021352
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2593346 - 2595472 bp
Length : 2127 bp
Strand : -
Note : COG2217 Cation transport ATPase

DNA sequence :
ATGAGTCCTTCACATGATCAGCAGCATTCAGACAGCGGAAAAATTTCGGCACATCATGCTCATCATGCAGACATGGTTGC
TCACCACGAGGACGCCGTAGACGATGAACATCAGATTCATAAGCATGGAGAACACGCAGGACATAGCGTGGTTATGTTCA
AAAATAGATTCTGGTGGGTAGCGGCGCTCTCTCTGCCAGTCGTGTTTTTCAGTCCCATGTTTGCTGATCTGATTGGCTAT
CAAATTCCTAGTTTCCCGGGGAATATGTGGATTGCACCAGTTTTGGGCACCATAATTTTTATTTATGGAGGAATGCCTTT
TCTAAAGGGTGGAGTTCAGGAGCTGAGATCTTCTAAGCCTGGCATGATGCTGTTGATTGCGATGGCGATTACCGTCGCAT
TTGTAGCATCGTGGGTAACCACTTTGGGTATTGGTGGCTTTCACCTAGATTTTTGGTGGGAGCTTGCCTTATTGGTGACC
ATTATGCTGCTGGGACATTGGCTAGAAATGCGTGCCCTAGGAGCCGCATCCTCCGCATTAGACGCCTTGGCTGCTTTATT
ACCTGATGAAGCAGAAAAGATTGTTGATGGAGAAGCGCGCATAGTTCCAACTGCGGAGTTATTGGTCGGTGATGTAGTAC
TAGTTCGTGCAGGAGCTAGGGTGCCAGCAGATGGGACAATTACGGAGGGATCTGCTGAGTTTGATGAATCGATGATAACT
GGTGAATCTCAGCCTATTTTCCGAAACATTGGTGATCGCGTAGTTGCTGGAACTGTTGCAACTGACAACAGCGTACGTAT
TAGTGTAGCCGCCACTGGTAGCAATACAGCTTTGGCGGGAATTCAACGAATGGTTGCAGTTGCCCAGGAGTCCTCGTCGA
GAGCTCAGGCATTAGCAGACCGCGCGGCAACATGGTTGTTTTGGTTTGCGTTGATTTCGGCACTTATCACTGCTGTGGTT
TGGACTGTGATTGGAAGTCCTAATGATGCAGTGGTGCGCACGGTGACGGTGTTGGTGATTGCATGTCCGCATGCTTTAGG
GTTGGCGATTCCACTCGTGATCGCAATTTCAACAGAGCGCGCTGCACAATCAGGAGTGTTGATTAAAGATCGCATGGCGC
TAGAGCGCATGCACACCATTGATGTTGTCCTTTTTGATAAAACTGGCACTCTAACCGAAGGAGCTCATGCAGTTACTGGT
GTTGTTACCGATTCCGGCATTTCAAATGGGCAACTGCTTGCATTAGCTGCTGCGGTGGAATCTGATAGTGAACATCCAGT
GGCGCGTGCCATTGTTACTGCTGCCCGCAAAGATTCAGAAGCAGCCTCTTTTGATCTAAAAAGTCAGGACTTTAGTGCAA
TACCTGGCCGAGGTGTGCGGGCTACGGTCGATGGGGATGACATTTTAGTCGGTGGGCCTAATATGCTCCGTGAAGTTGAT
TTGTACATTCCTGAAAATATCAAACCACAGGTTGAACGGTGGACTCAGCGGGGAGCAGGAGTTCTGTTTGTTATAAATGA
CAAACAGATATGGGGTGCGTTGGCTGTAGAAGACCAAATTCGTCCTGAATCTCGTGGAGCAGTTCGCGCGTTGCAGGCAC
GGGGCATCAAGGTGGCGATGATTACGGGTGATGCTTTGCAAGTAGCGTCTGCAGTAGGTCAAGAGCTAGGTATTGACGAG
GTTTTTGCTGAAGTCCTCCCGCAGGACAAAGATACGAAAGTATCTGAACTTCAACATCGAGGTTTAACAGTCGCAATGGT
TGGTGATGGCATTAATGATGCTCCTGCCTTGGCCCGAGCTGAAGTTGGAATTGCTATTGGTGCAGGTACAGATGTAGCCA
TCGAATCTGCAGGTGTTGTTCTAGCAAGCAATGATCCAAGATCAGTCTTGTCAATGATCGAGCTATCTCGGGCAAGCTAC
CGCAAAATGATCCAAAACCTTGTTTGGGCATCAGGATACAACCTTGTGGCAGTTCCACTTGCAGCTGGAATTCTCGCCTC
AATTGGTTTCACGCTTTCCCCAGCAGTGGGGGCAATTTTGATGTCCGCATCGACCATTGTTGTTGCTTTGAACGCCCAAT
TGCTGCGTCGGATCAATCTTGCCCCAGTTGACTTGGCAGCCCGATGA

Protein sequence :
MSPSHDQQHSDSGKISAHHAHHADMVAHHEDAVDDEHQIHKHGEHAGHSVVMFKNRFWWVAALSLPVVFFSPMFADLIGY
QIPSFPGNMWIAPVLGTIIFIYGGMPFLKGGVQELRSSKPGMMLLIAMAITVAFVASWVTTLGIGGFHLDFWWELALLVT
IMLLGHWLEMRALGAASSALDALAALLPDEAEKIVDGEARIVPTAELLVGDVVLVRAGARVPADGTITEGSAEFDESMIT
GESQPIFRNIGDRVVAGTVATDNSVRISVAATGSNTALAGIQRMVAVAQESSSRAQALADRAATWLFWFALISALITAVV
WTVIGSPNDAVVRTVTVLVIACPHALGLAIPLVIAISTERAAQSGVLIKDRMALERMHTIDVVLFDKTGTLTEGAHAVTG
VVTDSGISNGQLLALAAAVESDSEHPVARAIVTAARKDSEAASFDLKSQDFSAIPGRGVRATVDGDDILVGGPNMLREVD
LYIPENIKPQVERWTQRGAGVLFVINDKQIWGALAVEDQIRPESRGAVRALQARGIKVAMITGDALQVASAVGQELGIDE
VFAEVLPQDKDTKVSELQHRGLTVAMVGDGINDAPALARAEVGIAIGAGTDVAIESAGVVLASNDPRSVLSMIELSRASY
RKMIQNLVWASGYNLVAVPLAAGILASIGFTLSPAVGAILMSASTIVVALNAQLLRRINLAPVDLAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 3e-89 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C629_11980 YP_008070118.1 hypothetical protein BAC0629 Protein 4e-132 49
C629_11980 YP_008070118.1 hypothetical protein BAC0079 Protein 5e-124 44
C629_11980 YP_008070118.1 hypothetical protein BAC0101 Protein 1e-87 44
C629_11980 YP_008070118.1 hypothetical protein BAC0383 Protein 3e-105 43
C629_11980 YP_008070118.1 hypothetical protein BAC0183 Protein 4e-77 42