|
Name : C629_07345 (C629_07345) Accession : YP_008069199.1 Strain : Corynebacterium glutamicum SCgG2 Genome accession: NC_021352 Putative virulence/resistance : Unknown Product : phosphomethylpyrimidine synthase ThiC Function : - COG functional category : - COG ID : - EC number : - Position : 1564415 - 1566178 bp Length : 1764 bp Strand : - Note : COG0422 Thiamine biosynthesis protein ThiC DNA sequence : ATGACGCCTACCCAAAATGAGATCCACCCGAAACATAGCTACTCCCCCATCCGCAAGGACGGTCTCGAGGTCCCGGAGAC CGAAATCCGCCTCGATGACTCGCCAAGCGGCCCCAACGAACCCTTCCGCATCTACCGCACCCGTGGCCCAGAAACCGACC CCAAGCAGGGACTTCCGCGGCTGCGCGAGTCATGGATCACCGACCGCGGCGACGTTGCCGCCTATCAGGGTCGCGAGCGT TTGCTTATCGACGACGGCCGCTCGGCAATGCGTCGAGGTCAAGCTTCGGCAGAGTGGAAAGGCCAAAAACCAGCTCCTTT GAAGGCGCTACCTGGCAAAAGAGTCACCCAAATGGCCTATGCGCGTGCTGGCGTGATTACTCGTGAAATGGAGTTTGTGG CGCTGCGCGAACACGTTGATGTGGAGTTTGTGCGCTCGGAGGTGGCACGCGGTCGGGCAATTATTCCCAACAACGTCAAC CATCCGGAATCTGAACCGATGATTATTGGTCGCAAATTTTTGACCAAAATCAACGCCAATATTGGCAATTCTGCGGTCAC CTCTTCAATCGAGGAAGAGGTGTCCAAGCTGCAGTGGGCCACGCGCTGGGGTGCCGATACCGTGATGGATCTATCCACCG GCGATGATATTCACACCACGCGCGAATGGATTATCCGCAACTCCCCCGTTCCTATCGGCACCGTCCCGATCTACCAAGCG CTGGAAAAAGTAAATGGCGTGGCCGCAGACCTTAACTGGGAAGTATTCCGCGATACCGTCATTGAGCAGTGTGAACAAGG CGTGGACTATATGACCATCCACGCCGGCGTACTACTGGCCTACATCCCACTGACCACCCGTCGCGTCACCGGCATTGTCT CCCGTGGCGGTTCTATCATGGCCGGTTGGTGTCTGGCGCACCACCGCGAATCATTTCTCTACGAGCATTTTGACGAGCTG TGCGAAATTTTTGCACAATATGACGTCGCATTCTCACTCGGTGATGGTCTACGCCCCGGCTCGCTTGCCGATGCCAACGA CGCCGCGCAATTCGCCGAGCTGAAAACCATTGGTGAACTCACCCAACGCGCCTGGGAATACGATGTACAAGTAATGGTCG AAGGACCTGGACACGTGCCACTAAACATGATCCAGGAAAACAACGAGCTGGAACAAAAGTGGGCAGCGGACGCACCTTTT TACACTCTTGGACCACTAGTTACCGACATCGCTCCAGGTTATGACCACATCACTTCTGCCATTGGTGCAGCTCACATCGC CATGGGTGGCACCGCCATGCTGTGTTATGTCACCCCGAAAGAACACCTTGGCCTGCCCAACCGTGATGACGTCAAAACCG GCGTAATCACCTACAAGCTCGCTGCCCACGCAGCAGATGTGGCCAAGGGTCATCCCGGCGCGCGTGCCTGGGACGACACC ATGAGCAAAGCGCGATTTGAATTCCGTTGGAATGATCAGTTTGCGCTCTCCCTCGACCCCGACACTGCAATCGCTTACCA CGACGAAACCCTGCCGGCAGAGCCTGCGAAAACCGCACACTTCTGTTCAATGTGTGGCCCGAAGTTCTGCTCCATGCGAA TTAGCCAGGACATTCGCGATATGTTTGGCGATCAAATCGCGGAATTGGGGATGCCTGGGGTTGGGGATTCTTCTAGTGCT GTTGCTTCTAGTGGGGCACGGGAGGAGATGGCTGAGAAATCCCGGGAATTTATTGCTGGTGGTGCGGAGGTTTATCGGCG TTAG Protein sequence : MTPTQNEIHPKHSYSPIRKDGLEVPETEIRLDDSPSGPNEPFRIYRTRGPETDPKQGLPRLRESWITDRGDVAAYQGRER LLIDDGRSAMRRGQASAEWKGQKPAPLKALPGKRVTQMAYARAGVITREMEFVALREHVDVEFVRSEVARGRAIIPNNVN HPESEPMIIGRKFLTKINANIGNSAVTSSIEEEVSKLQWATRWGADTVMDLSTGDDIHTTREWIIRNSPVPIGTVPIYQA LEKVNGVAADLNWEVFRDTVIEQCEQGVDYMTIHAGVLLAYIPLTTRRVTGIVSRGGSIMAGWCLAHHRESFLYEHFDEL CEIFAQYDVAFSLGDGLRPGSLADANDAAQFAELKTIGELTQRAWEYDVQVMVEGPGHVPLNMIQENNELEQKWAADAPF YTLGPLVTDIAPGYDHITSAIGAAHIAMGGTAMLCYVTPKEHLGLPNRDDVKTGVITYKLAAHAADVAKGHPGARAWDDT MSKARFEFRWNDQFALSLDPDTAIAYHDETLPAEPAKTAHFCSMCGPKFCSMRISQDIRDMFGDQIAELGMPGVGDSSSA VASSGAREEMAEKSREFIAGGAEVYRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-171 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-171 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 3e-162 | 58 |
