Gene Information

Name : ureC (C629_00505)
Accession : YP_008067845.1
Strain : Corynebacterium glutamicum SCgG2
Genome accession: NC_021352
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.5
Position : 110866 - 112578 bp
Length : 1713 bp
Strand : +
Note : COG0804 Urea amidohydrolase (urease) alpha subunit

DNA sequence :
ATGAGTTTTGAAATTTCCCGCAAGCAGTACACCGACCTTTATGGTCCAACCGTTGGCGATTCAGTACGTCTTGCTGATAC
TGAGCTTTTTCTCTGTGTGGAAAAAGATTACGCAGCAATCGGCGAAGAAGTAGCATTCGGCGGTGGCAAGGTCATTCGTG
ATGGCATGGGCCAAAATGGCACCTTGGTTCGCGATGTAGATATTCCCGATACCGTCATCACCAACGTCATCGTCCTTGAC
TATACGGGTGTGTACAAAGCTGACGTTGCGCTTCGAGATGGCAAAATCTTCCGAATCGGAAAGGCCGGAAACCCGAATGT
CATGGAAAACGTCGACATCGTCATCGGCGTTGCAACCGACATCATTGCTGGTGAAGGCAAGATCCTAACTGCAGGTGGCA
TTGATACTCACGTGCACTTTTTGGGCACAGACCAGGTCAACACTGCATTAGCGTCAGGCATCACCACGATGATCGGTGGA
GGCACCGGCCCAAGCCAGGCGTCGATGGCTACAACTGTCACGCCAGGTCAGTGGAATACCTACAACATGCTTAGTGCTTT
TGAAGGCATGCCCATGAACTTTGGCATTTTGGGTAAAGGCCATGGTTCTTCCAAATCTCCGCTGGCTGAGCAGGTTCGTG
CGGGTGCAATCGGTCTGAAAATTCACGAGGACTGGGGTGCCACACCATCGTCGATCAACACTGCCCTAGAAGTGGCCGAT
GATATGGACATCCAGGTGGCACTCCACTCCGATACCTTGAATGAGGCCGGTTTTGTGGAAGACACCATTGAAGCCATTGC
GGGCCGAGTCATCCATACCTTCCACACCGAAGGTGCTGGTGGTGGACACGCTCCTGACCTAATCCGAGTGGCTGCTCTGC
CAAACGTGTTGCCTGCATCCACCAACCCAACGCTTCCGTACACCAGAAACACTGTTGAAGAGCACCTGGATATGGTGATG
GTTGCCCACCACCTCAACCCAGATATTCCAGAAGACGTGGCTTTTGCGGATTCCCGTATTCGTGCGGAAACCATTGCTGC
CGAAGACGTGCTTCACGATATGGGCATTTTCTCTATTACTTCATCGGATTCCCAGGCGATGGGCCGAGTTGGAGAGACCA
TCACACGCACGTGGCAGGTCGCTGACCACATGAAACGCACCCGTGGATCACTAACGGGAGATGCTCCATACAACGACAAC
AACCGCTTGCGTCGATTCATCGCAAAGTACACCATCAACCCTGCGATTGCGCACGGTGTGGATTATGTTGTCGGTTCAGT
GGAGGAAGGCAAGTTCGCTGACCTCGTGCTGTGGGATCCAAAGTTCTTTGGTGTGAAACCTGATCTGGTGATCAAGGGTG
GGTTGATGGTGAACTCGCTCATGGGTGATTCCAACGGTTCCATTCCAACTCCGCAGCCCCGCACCCTGCGCAATACTTGG
GGTGCGTTTGGCCAGGCAGTTTCCAGAAGCTCCATTACATTCCTATCCCAGGATGCTATCGATGCAAATGTTCCTGATCT
GCTGAATCTGAGGAAGCAGATCCGGGGCGTTCGAGGTGTAAGGAATCTGACCAAACGAGACATGAAACTCAATGAAGAAA
TGCCTGATATTCGTGTCGATCCAGAGACCTACCAGGTGTTTGTCAACGGTGAGTTGATCACCAGCAAGCCAGCAGAGACA
GTGCCAATGGCACGTCGCTACTTCTTGTTCTAA

Protein sequence :
MSFEISRKQYTDLYGPTVGDSVRLADTELFLCVEKDYAAIGEEVAFGGGKVIRDGMGQNGTLVRDVDIPDTVITNVIVLD
YTGVYKADVALRDGKIFRIGKAGNPNVMENVDIVIGVATDIIAGEGKILTAGGIDTHVHFLGTDQVNTALASGITTMIGG
GTGPSQASMATTVTPGQWNTYNMLSAFEGMPMNFGILGKGHGSSKSPLAEQVRAGAIGLKIHEDWGATPSSINTALEVAD
DMDIQVALHSDTLNEAGFVEDTIEAIAGRVIHTFHTEGAGGGHAPDLIRVAALPNVLPASTNPTLPYTRNTVEEHLDMVM
VAHHLNPDIPEDVAFADSRIRAETIAAEDVLHDMGIFSITSSDSQAMGRVGETITRTWQVADHMKRTRGSLTGDAPYNDN
NRLRRFIAKYTINPAIAHGVDYVVGSVEEGKFADLVLWDPKFFGVKPDLVIKGGLMVNSLMGDSNGSIPTPQPRTLRNTW
GAFGQAVSRSSITFLSQDAIDANVPDLLNLRKQIRGVRGVRNLTKRDMKLNEEMPDIRVDPETYQVFVNGELITSKPAET
VPMARRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 1e-168 63
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 1e-168 63
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-176 63
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-178 63
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-178 63
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-178 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_008067845.1 urease subunit alpha VFG0270 Protein 3e-146 59