Gene Information

Name : C624_05285 (C624_05285)
Accession : YP_008065772.1
Strain : Corynebacterium glutamicum SCgG1
Genome accession: NC_021351
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1129599 - 1130297 bp
Length : 699 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAAATTTTAGTTGTTGATGATGAGCAAGCTGTACGTGACTCCTTGCGACGTTCCCTTTCGTTCAACGGATACAACGT
TGTTCTCGCAGAAGACGGCATCCAAGCACTAGAGATGATTGACAAGGAACAGCCTGCTTTGGTGATCCTCGATGTCATGA
TGCCTCGTATGGACGGACTTGAGGTCTGTCGTCACCTTCGCAGCGAAGGCGATGATCGGCCAATTCTTATTCTTACTGCC
CGCGATAATGTTTCTGATCGTGTCGGTGGCCTCGATGCTGGCGCAGATGACTATTTGGCTAAACCATTTGCTCTTGAAGA
GCTGTTGGCGCGCGTCCGTTCACTGGTGCGTCGCTCTGCAGTGGAATCAAATCAGAGTTCCAACATTGAACAGGCTCTAT
TATCTTGTGGCGATTTGACGCTTGACCCAGAAAGTCGAGATGTCTACCGCAACGGACGCGCCATCAGCCTTACTCGAACA
GAGTTCGCGCTCCTGCAATTGCTCCTCAAAAACCAAAGGAAAGTGCTCACTCGCGCCCAGATTTTGGAAGAGGTCTGGGG
CTACGATTTCCCCACTTCAGGCAATGCCCTCGAGGTCTACATTGGATACCTTCGACGCAAGACTGAATTGGAAGGAGAAG
ACCGCCTGATCCATACAGTACGAGGAGTCGGATACGTCCTGCGAGAGACCGCTCCGTGA

Protein sequence : 
MKILVVDDEQAVRDSLRRSLSFNGYNVVLAEDGIQALEMIDKEQPALVILDVMMPRMDGLEVCRHLRSEGDDRPILILTA
RDNVSDRVGGLDAGADDYLAKPFALEELLARVRSLVRRSAVESNQSSNIEQALLSCGDLTLDPESRDVYRNGRAISLTRT
EFALLQLLLKNQRKVLTRAQILEEVWGYDFPTSGNALEVYIGYLRRKTELEGEDRLIHTVRGVGYVLRETAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-31 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C624_05285 YP_008065772.1 hypothetical protein BAC0083 Protein 6e-32 48
C624_05285 YP_008065772.1 hypothetical protein BAC0125 Protein 5e-35 44
C624_05285 YP_008065772.1 hypothetical protein HE999704.1.gene1528. Protein 7e-36 44
C624_05285 YP_008065772.1 hypothetical protein BAC0308 Protein 5e-32 44
C624_05285 YP_008065772.1 hypothetical protein BAC0197 Protein 7e-32 43
C624_05285 YP_008065772.1 hypothetical protein NC_002952.2859858.p0 Protein 9e-33 42
C624_05285 YP_008065772.1 hypothetical protein NC_007622.3794948.p0 Protein 9e-33 42
C624_05285 YP_008065772.1 hypothetical protein NC_003923.1003417.p0 Protein 9e-33 42
C624_05285 YP_008065772.1 hypothetical protein NC_013450.8614146.p0 Protein 9e-33 42
C624_05285 YP_008065772.1 hypothetical protein NC_002951.3238224.p0 Protein 9e-33 42
C624_05285 YP_008065772.1 hypothetical protein NC_007793.3914065.p0 Protein 9e-33 42
C624_05285 YP_008065772.1 hypothetical protein NC_002758.1121390.p0 Protein 9e-33 42
C624_05285 YP_008065772.1 hypothetical protein NC_010079.5776364.p0 Protein 9e-33 42
C624_05285 YP_008065772.1 hypothetical protein BAC0487 Protein 1e-20 42
C624_05285 YP_008065772.1 hypothetical protein BAC0638 Protein 6e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C624_05285 YP_008065772.1 hypothetical protein VFG1390 Protein 1e-70 66
C624_05285 YP_008065772.1 hypothetical protein VFG1386 Protein 1e-44 48
C624_05285 YP_008065772.1 hypothetical protein VFG1389 Protein 4e-39 48
C624_05285 YP_008065772.1 hypothetical protein VFG0596 Protein 6e-32 43