Gene Information

Name : LP6_0816 (LP6_0816)
Accession : YP_008062533.1
Strain : Legionella pneumophila Thunder Bay
Genome accession: NC_021350
Putative virulence/resistance : Virulence
Product : UDP-N-acetyl-D-galactosamine dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.-
Position : 912257 - 913543 bp
Length : 1287 bp
Strand : +
Note : -

DNA sequence :
ATGTGCTTAAAACGAAGAATAGTAATGATGGGTCTGGGATATGTCGGTTTAACCCTTGCTGTCGCCTTGGGAAAAATTAC
AAGAGTGATAGCATATGATAAGAATTCATCACGGATTTCCGAACTTAAAAATGGCCAGGATAGGAATTTGGAAGTCGAAG
ATGATGCTTTAGCTGTAAGCGATCTTCTATTAACATCCGACCCGAAGGAACTGGAAAATGGTGATTTTTATATCATAGCT
GTTCCAACTCCATTGAATAAAAACAGGCAGGTTGATTTCTCAATGTTGTTTGAGGCAACAAAATTGGTTGGAAAATGTCT
TAAAAAGGGGGATATTGTTGTTTACGAATCATCTGTTTATCCAGGAGCTACAGAAGAGCAATGTATCCCGCTACTTGAAA
AAAGCTCCAAATTAATTTGCGGCGAGAGTTTTTCTGTAGGCTACTCTCCGGAACGTATTAATCCCTCAGATCAAGAGCAT
GTTCTTCAAAACATAGTGAAAATTGTTTCTGCCACTGATGGAGATACTTTGAATATTATCTCGGAAGTGTATAACAGCAT
AATTAACGCAGGAGTTTTTCCAGTTTCCTCCATACGCGTCGCTGAGGCGGCAAAGGTGATTGAAAATGCGCAAAGGGACA
TCAACATAGGTTTTATAAATGATATTGCTGTTATGTTGCATCATCTTGGCATTGATACAGCGGAAGTGATCCAGGCAATG
AAAACCAAATGGAATTATATCCCTTTTCAACCTGGATTAGTGGGTGGTCACTGTATCGGTATTAATTCATATTACTTGAT
GCACAAAGCGGAAGAGATTGGATATTACTCAAACCTTATTATGGCGGGAAGGCAGATTAATGAATCCATTGCAAAATTTA
TCGCAGAACAAACCATAAAACAGTTAATTCGCCAGGGAAGTCCTGTAAAAAGGGCGCGAATTGCAATTTTAGGATTAACC
TATAAGGAAAATTGTTCTGATCTCCGCGACACCCGAGTAATTGATATTATTAGAGAATTACAATCGTATGATACCGAGCT
ATTTATTCATGATCCTATCGCTGACGCTGTAGCCGCAAAGAAACATTACGGTATCGAACTTCAATCCTGGGAAAATCTTA
ATGATCTGGATGCCATGATTTTTACTGTGTCACATCAATACTATTTGACTATGGACAGACATGAAATAAAAAATAAATTA
AATTGGCACGGCCTTATCATGGATGTAAAAGAAATTTTTAATTATGAAGAGTTCAAGGATACTGGAATTTTACTCTGGAG
GCTATGA

Protein sequence :
MCLKRRIVMMGLGYVGLTLAVALGKITRVIAYDKNSSRISELKNGQDRNLEVEDDALAVSDLLLTSDPKELENGDFYIIA
VPTPLNKNRQVDFSMLFEATKLVGKCLKKGDIVVYESSVYPGATEEQCIPLLEKSSKLICGESFSVGYSPERINPSDQEH
VLQNIVKIVSATDGDTLNIISEVYNSIINAGVFPVSSIRVAEAAKVIENAQRDINIGFINDIAVMLHHLGIDTAEVIQAM
KTKWNYIPFQPGLVGGHCIGINSYYLMHKAEEIGYYSNLIMAGRQINESIAKFIAEQTIKQLIRQGSPVKRARIAILGLT
YKENCSDLRDTRVIDIIRELQSYDTELFIHDPIADAVAAKKHYGIELQSWENLNDLDAMIFTVSHQYYLTMDRHEIKNKL
NWHGLIMDVKEIFNYEEFKDTGILLWRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-102 49
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 5e-90 48
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 5e-90 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LP6_0816 YP_008062533.1 UDP-N-acetyl-D-galactosamine dehydrogenase VFG0431 Protein 2e-90 48