Gene Information

Name : L593_08490 (L593_08490)
Accession : YP_008054441.1
Strain : Salinarchaeum sp. Harcht-Bsk1
Genome accession: NC_021313
Putative virulence/resistance : Resistance
Product : zinc-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1872068 - 1874446 bp
Length : 2379 bp
Strand : +
Note : COG2217 Cation transport ATPase

DNA sequence :
ATGACTGCTGACGCTGCCGACGGCGCTGCTGGCAGGGACGACGGGGCCGCCGGTGGCGACGACGCCACCGCCGAGCTCCG
GCTGTCGGTCCCCGACATGGACTGCGCCTCGTGTGCGGGCAAGGTCGAGCACGCGATCGAGGGGATCGACGGCGTCGCGG
CGTTCGACACCCGCCCGACGACGGGCACGCTGAAGCTCACCTACGACTCCGCAGGGATCTCGATCGAGGAAATCGTCGCG
TCGATCGAAGCGGCTGGCTACGAGGTCGTCGACGCACCGTCCGAGAGCGGCGGCGGTGCTGCCGATCGGGACGGCGACGG
GGCGGACGATCACGCGACCGACGCCGCCACGGAGCAGCGCCTGCTGACGAGTTCGCGGGCGGTGAAGACCTGGATCGCCG
GTGCGTTGCTCGCGATCGGTCTCGGACTCGAGTTCGTCGTCGCTGGCGCGGACCCGCAGGTCGCGACGGTGCTGGGCAGC
GAACTTCACCTCGCGGACGTCCTCTTCGTCGGTGCCGTTTCGATCGGCGGGCAGGAGATCCTCCGTGGCGGCGTCGTTTC
CGCCCGGCAGCGGAACCTCGACATCGACTTTCTGATGTCGACGGCGATCGTCGGCGCGCTGGTCGCGAGCGTCGGCTTCG
GCGAGGCGCTGTACTTCGAGGCCGCGACGCTCGCCGTCCTGTTCTCGATCGCGGAACTGCTCGAGACCGCGTCGATGCAG
CGGGCCCGCAGCTCCTTCGAGGAGCTGGTCGAACTTTCGCCAGAGGAGGCGACAGTGTGGCGTGACGGCGAGGAGGTGAC
GGTGCCCGTCGGTGCACTCGAAATCGGCGAGGTCGTCGTCGTGCGCCCCGGGGAGCAGGTCCCCACCGACGGCGAGGTGA
CCGATGGCGAGAGCGCGGTGAACCAGGCGCCGATCACGGGCGAGTCGGTGCCCGTCGACAAGACCGTCGGCGACGAGGTC
TACGCCGGGACGATCAACGAGGAGGGGTATCTCGAGGTGCAGGTCACCGCCGAGGCCTCGGACACGACGCTCTCCCGCAT
CGTGGAGTTGGTCGAGGACGCGCAGGCGAACAAGACCGAGCGGGAGCAGTTCGTCGAGCGCTTCGCGGACTACTACACGC
CCGCGGTCGTCGCGTTCGCCATCCTCGTGACGCTCGGGACGCCGTTCCTGATGGGCGTCACCTGGCCGACGGCCGTGGTG
TACGGTCTCACGCTGCTCGTGCTCGCCTGCCCCTGCGCCTTCGTCATCTCGACGCCCGTCTCGGTGGTCTCGGGGATCAC
CAGCGCCGCGAAGAACGGGGTCCTGATCAAGGGCGGCAATCACCTCGAGGCGATGGGCGCCGTCGACGCCGTCGCCTTCG
ACAAGACCGGGACGCTGACGAAGGGCGCGTTGACCGTGACCGACGTCGTGCCGCTGAACGGGAACTCCCAGGAGGACGTG
CTGGCGTGCGCTCACGGCCTCGAGACCCGCTCGGAGCACCCCATCGGCGAAGCGATCGTCGCGGAAGCCGGTGCGGCAGG
CGTGGCGTCGGGCAATCGCGCGGTCGACGACTTCGAGTCGATCACTGGCAAGGGCGTCCGCGCAGAACTCGGTGGGACGC
CCCACTTCGCGGGCAAGCCCGGTCTCTTCGACGAACTCGGCTTCGACCTGTCCCACGTCCACGCGACGACCGACGGCGGC
GTTGTGACGCGGACCGCCAGGCAGATTTGTGACCGGAACAACTGCCTCGATCTCCTGGAGGAGACGGTGCCCGAACTCCA
GGCCGAGGGCAAGACCGTCGTGCTCGTCGGCACCGACGACGAACTCGAGGGCGTCATCGCCGTCGCGGACGAGGTCCGCC
CCGAAGCCAAGCGTACGATCGAGCGCCTGCGCGACCTCGGCGTCGACCGCACGGTGATGCTCACCGGCGACAACGAGCGG
ACAGCCCGCGCGATCGCCGAGCAGGTCGGGGTCGACGAGTTCCAGGCCGAACTGTTGCCCGAGGAGAAGGTCGAGGCGGT
GGAGAAGCTGGATGCAGACACGGAGGGCGGCGTGGCGATGGTCGGCGACGGGATCAACGACGCGCCGGCGCTCGCGACGG
CGACCGTCGGCGTCGCGATGGGCGCCGCGGGGACCGACACCGCCCTGGAGACCGCCGACGTCGCGCTGCTCTCCGACGAC
CTCTCGAAGCTGCCCTACCTCTACGAACTCGCCGGCGACGCGAACGGCGTCATCCGGCAGAACGTCGTGGCGAGCCTCGG
CGTGAAGGCCGGATTGGCGCTCGCGGTGCCGTTCGGACTGGTGCCGATCTGGCTGGCCGTCCTGGCGGGCGATGCCGGGA
TGACCATCGGCGTGACCGGGAACGCGATGCGGCTGTCGCGGGTCGAGGCCGATGGGTAG

Protein sequence :
MTADAADGAAGRDDGAAGGDDATAELRLSVPDMDCASCAGKVEHAIEGIDGVAAFDTRPTTGTLKLTYDSAGISIEEIVA
SIEAAGYEVVDAPSESGGGAADRDGDGADDHATDAATEQRLLTSSRAVKTWIAGALLAIGLGLEFVVAGADPQVATVLGS
ELHLADVLFVGAVSIGGQEILRGGVVSARQRNLDIDFLMSTAIVGALVASVGFGEALYFEAATLAVLFSIAELLETASMQ
RARSSFEELVELSPEEATVWRDGEEVTVPVGALEIGEVVVVRPGEQVPTDGEVTDGESAVNQAPITGESVPVDKTVGDEV
YAGTINEEGYLEVQVTAEASDTTLSRIVELVEDAQANKTEREQFVERFADYYTPAVVAFAILVTLGTPFLMGVTWPTAVV
YGLTLLVLACPCAFVISTPVSVVSGITSAAKNGVLIKGGNHLEAMGAVDAVAFDKTGTLTKGALTVTDVVPLNGNSQEDV
LACAHGLETRSEHPIGEAIVAEAGAAGVASGNRAVDDFESITGKGVRAELGGTPHFAGKPGLFDELGFDLSHVHATTDGG
VVTRTARQICDRNNCLDLLEETVPELQAEGKTVVLVGTDDELEGVIAVADEVRPEAKRTIERLRDLGVDRTVMLTGDNER
TARAIAEQVGVDEFQAELLPEEKVEAVEKLDADTEGGVAMVGDGINDAPALATATVGVAMGAAGTDTALETADVALLSDD
LSKLPYLYELAGDANGVIRQNVVASLGVKAGLALAVPFGLVPIWLAVLAGDAGMTIGVTGNAMRLSRVEADG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 2e-113 46
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 5e-114 45
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 5e-114 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L593_08490 YP_008054441.1 zinc-transporting ATPase BAC0298 Protein 6e-85 43
L593_08490 YP_008054441.1 zinc-transporting ATPase BAC0100 Protein 2e-53 42
L593_08490 YP_008054441.1 zinc-transporting ATPase BAC0092 Protein 2e-82 41