Gene Information

Name : BRPE64_BCDS05360 (BRPE64_BCDS05360)
Accession : YP_008047797.1
Strain :
Genome accession: NC_021294
Putative virulence/resistance : Virulence
Product : Two component transcriptional regulator winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 537962 - 538675 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGTCCTGATTGTCGAAGACGAACACAAGGTAGTGGATTACTTGCGCTCGGGGTTGACCGAGCAAGGCTGGGTCGT
CGATGTCGCCATGGACGGCGAGGAAGGCACGCATCTCGCCATCGAATACGACTACGACGTGATCGTGCTCGACGTAATGC
TGCCGCGCCGCGACGGCTTCGCCGTGCTGAAGGCGCTGCGTCTGCAGAAGTCGACGCCCGTCATCATGCTCACGGCGCGC
GATCACATCAACGATCGCGTGCGCGGTCTGCGCGAAGGCGCGGACGACTATCTGACCAAGCCGTTCTCCTTTCTCGAACT
CGTCGAGCGGTTGCATGCGCTCGCCCGCCGCACGCGCGCACAGGAATCGACGCTCATTTCCGTGGGCGATCTGTACGTCG
ATCTGATCGGCCGCCGCGCCACCCGCGACGGCGTGCGGCTCGATCTCACCGCGAAGGAGTTTCAACTGCTCTCCGTGCTC
GCGCGCCGCCACGGCGACATTCTCTCGAAGACGGCGATCACCGAACTCGTCTGGGAAGTCGATTTCGAAAGCCATACCAA
CGTCGTCGAAACGGCCATCAAACGTCTGCGCGCGAAACTGGACGGACCGTTCCGCACGAAGCTGCTGCATACCGTGCGTG
GCATGGGCTATGTGCTCGAAGTGCGCGAAGCCCGCGACATGCGCGAAACACGAGAAGACGCGAGACCATCATGA

Protein sequence :
MKVLIVEDEHKVVDYLRSGLTEQGWVVDVAMDGEEGTHLAIEYDYDVIVLDVMLPRRDGFAVLKALRLQKSTPVIMLTAR
DHINDRVRGLREGADDYLTKPFSFLELVERLHALARRTRAQESTLISVGDLYVDLIGRRATRDGVRLDLTAKEFQLLSVL
ARRHGDILSKTAITELVWEVDFESHTNVVETAIKRLRAKLDGPFRTKLLHTVRGMGYVLEVREARDMRETREDARPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-49 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-48 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family BAC0197 Protein 3e-56 56
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family BAC0125 Protein 2e-57 53
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family BAC0083 Protein 9e-52 52
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family BAC0638 Protein 5e-44 50
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family BAC0111 Protein 1e-52 49
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family BAC0308 Protein 3e-51 48
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family BAC0347 Protein 3e-47 47
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family NC_002516.2.879194.p Protein 8e-29 41
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family CP000675.2.gene1535. Protein 3e-31 41
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family NC_002952.2859905.p0 Protein 4e-32 41
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family NC_013450.8614421.p0 Protein 6e-32 41
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family NC_007793.3914279.p0 Protein 6e-32 41
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family NC_002745.1124361.p0 Protein 6e-32 41
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family NC_009782.5559369.p0 Protein 6e-32 41
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family NC_002951.3237708.p0 Protein 6e-32 41
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family NC_003923.1003749.p0 Protein 5e-32 41
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family NC_002758.1121668.p0 Protein 6e-32 41
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family NC_007622.3794472.p0 Protein 4e-32 41
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family NC_009641.5332272.p0 Protein 6e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family VFG0596 Protein 8e-50 50
BRPE64_BCDS05360 YP_008047797.1 Two component transcriptional regulator winged helix family VFG1389 Protein 5e-37 49