Gene Information

Name : SPISAL_02475 (SPISAL_02475)
Accession : YP_008046055.1
Strain : Spiribacter salinus M19-40
Genome accession: NC_021291
Putative virulence/resistance : Virulence
Product : manganese ABC transporter ATP-binding protein SitB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 503593 - 504381 bp
Length : 789 bp
Strand : +
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGAGGGATAAGTCGGCCAATCGTCCGCCGCTGCACGAGCCGGATCTTGCCCTTCACGTGGAGGATCTGACCGTTACCTA
TGGCGAGCGCCCGGCGTTGTGGGACATCGATCTGGATATCCCGCCTGGCGTGCTGGCCGGGATCATTGGGCCGAATGGTG
CGGGCAAAAGCACCCTGATTCGCGCCATTCTGGACCTGGTTCGTCGCTCCGCGGGCCATGTTCGCCTATTTGGGCACCCG
TATCGGGCGCAGCGCCTGCGCGTGGGGTATGTGCCTCAACGCAGTAGTGTCGATTGGGAATTTCCGACCAGTGCGCTTGA
TGTGGTGACCATGGGCCTCTATGGGGAATTGGGGTGGTGGCGGCGACCGGGTCGGTCCGAGCGCGATCGGGCCCTGCGTG
CCCTCGAGCAAGTCGGGTTGGAAGGCCTGGCCGATCGCCAGATCAGTGAGCTTTCGGGTGGTCAGCAGCAGCGCGTCTTC
ATTGCCCGGGCGCTGGTCCAGCAGGCGGATATTTATTTCCTTGATGAGCCGATGGCCGGAGTGGACGCCACCACCGAGCG
CGCGATCATCGATCTGCTGCGCGAGCTCCGGGATGCCGGTCGCACGGCCATCGTGGTCCACCATGACCTCCAGACGGTGC
GCAGCTATTTCGACTGGCTCATCCTCATGAATCGGCGTGTGATCGCACAAGGCCCCGTCGAAAAGGTCTACACCGCTGAC
AACCTCCGTCGCACCTATGGCGGGCAGGTCGCCTTGCTGGATACCGGGCATGATCCCGCTGCTCTCTGA

Protein sequence : 
MRDKSANRPPLHEPDLALHVEDLTVTYGERPALWDIDLDIPPGVLAGIIGPNGAGKSTLIRAILDLVRRSAGHVRLFGHP
YRAQRLRVGYVPQRSSVDWEFPTSALDVVTMGLYGELGWWRRPGRSERDRALRALEQVGLEGLADRQISELSGGQQQRVF
IARALVQQADIYFLDEPMAGVDATTERAIIDLLRELRDAGRTAIVVHHDLQTVRSYFDWLILMNRRVIAQGPVEKVYTAD
NLRRTYGGQVALLDTGHDPAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 5e-51 44
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 7e-51 44
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-45 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-45 44
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 6e-46 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-45 43
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 9e-46 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPISAL_02475 YP_008046055.1 manganese ABC transporter ATP-binding protein SitB BAC0400 Protein 5e-71 57
SPISAL_02475 YP_008046055.1 manganese ABC transporter ATP-binding protein SitB BAC0440 Protein 5e-49 44
SPISAL_02475 YP_008046055.1 manganese ABC transporter ATP-binding protein SitB BAC0350 Protein 4e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPISAL_02475 YP_008046055.1 manganese ABC transporter ATP-binding protein SitB VFG0526 Protein 4e-46 43