Gene Information

Name : SPISAL_01945 (SPISAL_01945)
Accession : YP_008045953.1
Strain : Spiribacter salinus M19-40
Genome accession: NC_021291
Putative virulence/resistance : Unknown
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 395332 - 397944 bp
Length : 2613 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGCGGATGGACAAACTGACCACCAAATTCCAGATGGCGCTGTCCGAAGCGCAATCCCTCGCACTTGGGCGCGACCACCA
GATGATCGAGCCTGAGCACCTGGGCCTCGCCATGCTCGATCAGGAGGGCGGCGGCGTTCGCCACTTGCTCCAGCAGGCCG
GGGTAAACGTCAACCTGCTGCGCTCGCAGATCGGCGAGGCGCTCGACCGGCTGCCGACCGTCTCTGGCGCGGCCGGCGAG
GTGCACGTCAGTAATGACCTGAACCGCCTGCTTAACCAGACGGATAAGCTCGCGCAAAAACGTGGGGATAGCTACATCTC
CAGTGAGCTCTTTTTGCTCGCGGCCCTCCAGGATGGCAAGACCCGCGTCGGCGAGAGTCTCACGCAGGCTGGGGCCAACA
AAGACGCCCTCGAGAAAGCGATCGAGGCGACCCGTGGCGGCGAGAATGTCGATGATCCCAACGCCGAGGATCAGCGTCAG
GCGCTCGAGAAGTACACCATTGATCTCACCGAGCGGGCCGAGCAGGGCAAGCTGGATCCGGTGATTGGCCGCGATGAGGA
AATCCGCCGTACTATCCAGGTCCTGCAGCGGCGCACCAAGAACAACCCCGTGCTGATCGGCGATCCTGGTGTTGGTAAAA
CCGCGATCGTCGAGGGCCTGGCGCTGCGGATCGTGAACCACGAGGTGCCCGAAGCGCTGAAGCAAAAGCGCGTCCTCGCG
CTGGATATGGGCGCGATGGTCGCCGGCGCAAAGTACCGCGGCGAGTTCGAAGAGCGCATGAAGGGTGTGCTGAAAGACCT
TGCCAAGCAGGAAGGCGAGATCATTCTGTTTATCGATGAAATTCACACCATCGTGGGGGCCGGTAAGGCCGAGGGCTCGA
TGGACGCGGGCAATATGCTTAAGCCTGCCCTCGCCCGCGGTGAGCTCCACTGCATCGGCGCGACCACGCTGGATGAGTAT
CGCACCAATATCGAAAAGGACGCCGCGCTGGAGCGGCGCTTCCAGAAAGTGCTGGTCGACGAACCGAGTGTGGAGGACAC
CGTGGCGATCCTGCGGGGGCTCAAGGAGCGCTACGAAGTCCATCACGGCGTAGAAATTACGGACCCGGCGATTGTCAGCG
CGGCGACGCTCTCCCAGCGCTACATCACTGACCGCAAACTGCCTGACAAAGCCATCGACCTGATCGACGAGGCCGCCAGT
CGGATCCGCATCGAGATCGACTCCAAGCCGGAGGCGATGGATCGGCTCGAACGCCGGCTCATTCAGCTCAAGATCGAGCG
TGAGGCGCTGAATAAGGAAGCCGACGAGGCCTCCCGTAAGCGGCTGGCGACACTCGAGGGCGAGATCGCAGAGATCGAGC
ATGAGTACAACGAAATGGAGTCGATCTGGACCGCCGAGAAAGCGGCGGTGCAGGGGGCGACGGGCCTGAAAGAGTCGCTC
GAGCAGGCGCGCCAGGAGCTCGAGACCGCGCGCCGGGCGGGGGATCTCACCCGCATGTCGGAACTCCAGTACGGGCGCAT
CCCCGAGCTCGAGCAACAGCTTGCCAGCGCCTCCGAAGCCGAGGGTCAGCAGGAAAGGCAGCTGCTGCGGAACTCAGTGA
CCGAAGAAGAGGTGGCGGAAGTGGTCTCCAAGTGGACCGGCATTCCCGTCTCGAAGATGCTCGAGGGCGAGCGCGACAAG
TTGCTGCGCATGGAACACGCCCTGGGTGACCGGGTGATCGGCCAGGCCGAGGCGGTGGAGGCCGTATCCAACGCCATCCG
GCGCTCCCGGGCGGGGCTGTCCGACCCCAACCGCCCGAATGGCTCGTTCCTGTTCCTCGGGCCGACGGGTGTGGGCAAGA
CCGAGCTCTGCAAGGCCCTCGCCACGTTCCTCTTCGACACCGAAGAGGCGATGGTGCGCATCGATATGTCGGAGTTCATG
GAAAAGCACTCGGTAGCCCGGCTGATCGGCGCACCGCCGGGGTATGTCGGCTATGAGGAGGGCGGTTATCTGACCGAGGC
CGTCCGCCGCAAGCCCTACTCCGTGCTGCTGCTCGACGAGGTCGAAAAGGCCCATGCGGATGTCTTCAATATCCTGCTGC
AGGTGCTCGACGACGGGCGTCTGACAGACAGCCACGGCCGGACAGTCGATTTCCGCAACACGGTCATAGTCATGACCTCC
AACCTGGGCTCGCACCTGATCCAGGAGCACGCCGGGGAGTCGCAGTACGACGAGATGAAGCGCCAGGTCATGGGCGTGGT
CTCGCAACACTTCCGCCCGGAGTTCATCAACCGCGTCGATGATGTGGTGGTGTTCCACCCGCTCGAGCGGGAGCAGATCC
GGCGCATCACCGAGGTGCAGGTGCGGTATCTCTCCGAGCGGCTGCGTGAGCGCGAGATGGCACTGGAGCTGACCGACGCC
GCCCTGGATGTCATCGGCGAGGCCGGCTTTGATCCGATTTACGGCGCACGGCCACTGAAGCGCATCCTGCAGCAGCGGGT
TGAGAACGTGCTCGCCCAGCGCATCCTCGCGGGTGAGTTCGCGCCGGGTGACCGCATTCGGGTCGATGCCGTCGGCGGTG
AGGAGGCGAGTGAGCTGCGCTTTGAGCGGGTAAACGAGCCCGCCGAGGCCTAA

Protein sequence :
MRMDKLTTKFQMALSEAQSLALGRDHQMIEPEHLGLAMLDQEGGGVRHLLQQAGVNVNLLRSQIGEALDRLPTVSGAAGE
VHVSNDLNRLLNQTDKLAQKRGDSYISSELFLLAALQDGKTRVGESLTQAGANKDALEKAIEATRGGENVDDPNAEDQRQ
ALEKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGDPGVGKTAIVEGLALRIVNHEVPEALKQKRVLA
LDMGAMVAGAKYRGEFEERMKGVLKDLAKQEGEIILFIDEIHTIVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEY
RTNIEKDAALERRFQKVLVDEPSVEDTVAILRGLKERYEVHHGVEITDPAIVSAATLSQRYITDRKLPDKAIDLIDEAAS
RIRIEIDSKPEAMDRLERRLIQLKIEREALNKEADEASRKRLATLEGEIAEIEHEYNEMESIWTAEKAAVQGATGLKESL
EQARQELETARRAGDLTRMSELQYGRIPELEQQLASASEAEGQQERQLLRNSVTEEEVAEVVSKWTGIPVSKMLEGERDK
LLRMEHALGDRVIGQAEAVEAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALATFLFDTEEAMVRIDMSEFM
EKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHADVFNILLQVLDDGRLTDSHGRTVDFRNTVIVMTS
NLGSHLIQEHAGESQYDEMKRQVMGVVSQHFRPEFINRVDDVVVFHPLEREQIRRITEVQVRYLSERLREREMALELTDA
ALDVIGEAGFDPIYGARPLKRILQQRVENVLAQRILAGEFAPGDRIRVDAVGGEEASELRFERVNEPAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 8e-164 44
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-102 43