Gene Information

Name : SPISAL_06630 (SPISAL_06630)
Accession : YP_008046885.1
Strain : Spiribacter salinus M19-40
Genome accession: NC_021291
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1367242 - 1367925 bp
Length : 684 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
GTGGCAAGCATTCTGCTGGTGGAGGACGAAGAGGCGATCCGGGAGATGATTGCAATGTCCCTGGAGCGGGCGGGCTATCG
CGTGCGTCACGCCGAGTCAGCGGAGGATGCCGACGCGGCGATTCGACTGAGCCAGCCGGATCTGATTCTGCTGGACTGGA
TGTTGCCGGGCGAAAACGGTATCGATTTTGCGCGTCGTCTCAAGCGCGACCGGGCCACGCGGGATCTGCCGATCATTATG
CTCACGGCTCGGGATGCCGAAGCGGATCGCGTCAAGGGACTGGATATTGGCGCGGATGACTACGTCGCGAAGCCGTTCTC
ACCCAAGGAGCTCCTTGCACGAATCAAGGCTGTGCTGCGGCGTGCCCAGCCGGCAGCCGGTGACCAACCGGTCGAAATCC
GTGGCCTGCGGCTTGATCCCGTCAGTCATCGCATTGCGGCAGACGGACGGGCCGTTACGCTGGGGCCTACGGAGTACCGC
CTGTTGCACTTCCTGATGACCCACCCGGATCGTGTATTCAATCGGGCGCAGCTTCTCGATAATGTATGGGGAGCGAACGT
TTACGTTGAGGAGCGAACCGTCGATGTTCATGTCCGCAGGCTGCGCAAAGGGTTGGCGCCGACGGGTCACGACGATCTGG
TGCAGACGGTGCGTGGGGCCGGGTACCGCTTCTCTGCCGAATAG

Protein sequence : 
MASILLVEDEEAIREMIAMSLERAGYRVRHAESAEDADAAIRLSQPDLILLDWMLPGENGIDFARRLKRDRATRDLPIIM
LTARDAEADRVKGLDIGADDYVAKPFSPKELLARIKAVLRRAQPAAGDQPVEIRGLRLDPVSHRIAADGRAVTLGPTEYR
LLHFLMTHPDRVFNRAQLLDNVWGANVYVEERTVDVHVRRLRKGLAPTGHDDLVQTVRGAGYRFSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_008702.1.4607594. Protein 4e-38 42
SPISAL_06630 YP_008046885.1 two component transcriptional regulator AE000516.2.gene3505. Protein 4e-32 42
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 4e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 4e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator AE015929.1.gene1106. Protein 7e-33 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 4e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 4e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 4e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 4e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 4e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 4e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_011595.7057856.p0 Protein 4e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_010410.6002989.p0 Protein 4e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_010400.5986590.p0 Protein 1e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator NC_012469.1.7685629. Protein 7e-38 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator HE999704.1.gene2815. Protein 3e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPISAL_06630 YP_008046885.1 two component transcriptional regulator VFG0596 Protein 2e-30 41
SPISAL_06630 YP_008046885.1 two component transcriptional regulator VFG1390 Protein 9e-37 41