Gene Information

Name : SPISAL_05730 (SPISAL_05730)
Accession : YP_008046705.1
Strain : Spiribacter salinus M19-40
Genome accession: NC_021291
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1172635 - 1175217 bp
Length : 2583 bp
Strand : +
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence :
ATGGCCGAAGACGCTCCGCACACACCCATGATGCGTCAGTTCCTGCGCATTAAGGCAGAACACCCGGATGTTCTGCTTTT
TTATCGCATGGGTGATTTCTATGAGCTTTTCTACGACGATGCCCGCCGGGCAGCCGGGCTTCTCGATATTACGCTGACCC
AGCGCGGTGAATCGGCGGGCGCACCGATCCCTATGGCCGGCATTCCCGCGCATGCCTATGAGGGCTATCTCGCACGTCTC
CTTGCCCGCGGCGAATCCGTCGCGATTTGCGAGCAGGTCGGCGATCCCGCCAGCAGCAAAGGGCCGGTTGAGCGGCAAGT
GGTGCGGATCGTCACGCCCGGCACGCTCACGGATGAGGCGCTGCTCGACGCGCGACGCAGCAATCTTCTGACAGCAGTCG
CCGGCTCGGCAGCACAATGGGGACTGGCCACGCTGGAATTGGCGGCCGGGCGTTTCAGTGTGACTGAAGGCACGGGTGAA
ACCGCGCTGGCTGCCGAACTGGAGCGCCTGGCGCCCGCTGAACTGTTACTACCCGATGACCTACCGGATTCGGCTGCCTG
GACGGCTCGGCGCGGCCTCACTCGCCGACCGCCCTGGCACTTCGTGCATGACGCCGCAACACGAACGCTGACCGAGCATT
TCGGCACCCGTGACCTCAATGGATTTGGCGTCGCCGACATGCCCCGAGCCATCGCGGCAGCGGGCGGGCTATTGCAGTAC
GTCCGTGACACTCAGCGTGCCGCCCTACCGCATATCCGCCACCTGGGCGTGGAGAGCAGCGACGAGGCGATCATGATCGA
CGCCGCCAGTCGTCGAAACCTCGAACTGGAAAACAATCTGGCGGGTGGCCGCGAGCACACCCTCGCAGCCGTCCTCGACA
CCACGGTCACGGGGATGGGCAGCCGACTGCTCCGGCGCTGGATCAACCGGCCACTCCGCGATCACGGCGAGCTGCTTGCC
CGACAGGCGGCGATTGGGGCGCTTCTGCCCGGCGGCCTTCACGCGCCCCGCGACCTCCTGCAGCGATGTGCCGACATCGA
GCGTATTGCCGCCCGCATCGGCATGCGGACCGCCCGCCCCCGCGACCTGACCGGTCTGCGCGATACGCTGGCCTGCCTGC
CCGACCTCCATGGCGCCCTCGCCGCGTTCACCGATCCCCGGCTGCAAACCCTGACGGCCGCCCTGACACCCCGGCCAGCC
GTTGCCGCGCAGCTTCAACGCGCCATCGTCGAGCAGCCTCCAGTCATCCTGCGCGATGGCGGTGTGATCGCGGAGGGCTA
CGATGCTGAACTCGATGAACTGCGGGGCCTCTCCCGTAACGCGGATGGCTTTTTGCGTGATCTTGAGCAACGTGAACGCG
AATCAACCGGCCTGTCCACGCTCAAGGTGAGCTACAACCGGGTCCATGGCTATTACATCGAAATTAGCCGTGGCCAAGCC
GATCAGGCTCCAGAGCGCTATATCCGTCGCCAGACATTAAAGGGGGCCGAGCGTTACATCACGCCCGAGCTCAAGGAATT
TGAAGACAAGGTGCTCTCTGCGAAAGAGCGCGCGCTGGCTCGGGAAAAGGCCCTGTACGAATCGCTGATCACCGCACTGG
CCGAATCGCTCGAGGACTGGCTGGCCCTCGCCGAAGCGCTGGCGGAGCTCGACACCCTCACCACGCTTGCCGAGCGCTCC
GCCACCCTGGGTTACCGCGCACCGGTTCTCGATAGCGAACCCGGCATCGAACTCACCGCCGCGCGCCACCCGGTCGTGGA
GCAAAGCCTTGACGCCCCCTTCGTCCCCAATGACATTGCGCTCAATGAGCAACAGCGCATGCTGGTGATCACGGGCCCGA
ACATGGGGGGCAAGTCCACCTACATGCGCCAGATCGCGCTGCTGACCCTCATGGCCCATATCGGCAGCCATGTGCCAGCG
GATGCGGCCCGGTTCGGGCCCATCGATCGTATCTTTACCCGCATTGGCGCCTCGGATGACCTCGCAGGCGGTCGATCCAC
GTTCATGGTCGAAATGACCGAGACGGCCAACATCCTCCACAACGCCACGCCTTCAAGCCTGGTTTTGCTCGATGAAATCG
GCCGTGGCACCAGTACATTTGATGGCCTGGCACTGGCATGGGCAACGGCCGAGGCCCTGTGTGGCCAGATCGGTGCGTTC
ACGCTTTTTGCCACGCATTACTTCGAGATGACCGCCCTGCCGGCGCAGTACCCGAGCGCGGCCAATGTGCATCTGCAAGC
CGTTGAACACGGCGAGCGAATCGTCTTTCTGCATCGCGTCCAGCCAGGAGCTGCCAATCAAAGCTATGGCTTGCAAGTGG
CGGCACTCGCTGGCGTACCCGACGCGGTCCTCACGGCGGCGCGCCAGAAACTGACCGAGCTTGAACAGGGCGACGGCGGC
CCGCCGCAGCTGCCGCTGTTCGCGGCCCCGCCGGCCGAGCCACCTCCCCAGCCAGCGATGGACGGCCCAGAGCGCGCGGT
GCTTGAAGAGATTGAGGGCCTCGATCCAGATGCATTAACGCCCCGAGACGCGCACGCACTGCTCTATCGCCTACGAGCAC
TTGCGAAACCCCATGAGCGGTAG

Protein sequence :
MAEDAPHTPMMRQFLRIKAEHPDVLLFYRMGDFYELFYDDARRAAGLLDITLTQRGESAGAPIPMAGIPAHAYEGYLARL
LARGESVAICEQVGDPASSKGPVERQVVRIVTPGTLTDEALLDARRSNLLTAVAGSAAQWGLATLELAAGRFSVTEGTGE
TALAAELERLAPAELLLPDDLPDSAAWTARRGLTRRPPWHFVHDAATRTLTEHFGTRDLNGFGVADMPRAIAAAGGLLQY
VRDTQRAALPHIRHLGVESSDEAIMIDAASRRNLELENNLAGGREHTLAAVLDTTVTGMGSRLLRRWINRPLRDHGELLA
RQAAIGALLPGGLHAPRDLLQRCADIERIAARIGMRTARPRDLTGLRDTLACLPDLHGALAAFTDPRLQTLTAALTPRPA
VAAQLQRAIVEQPPVILRDGGVIAEGYDAELDELRGLSRNADGFLRDLEQRERESTGLSTLKVSYNRVHGYYIEISRGQA
DQAPERYIRRQTLKGAERYITPELKEFEDKVLSAKERALAREKALYESLITALAESLEDWLALAEALAELDTLTTLAERS
ATLGYRAPVLDSEPGIELTAARHPVVEQSLDAPFVPNDIALNEQQRMLVITGPNMGGKSTYMRQIALLTLMAHIGSHVPA
DAARFGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATPSSLVLLDEIGRGTSTFDGLALAWATAEALCGQIGAF
TLFATHYFEMTALPAQYPSAANVHLQAVEHGERIVFLHRVQPGAANQSYGLQVAALAGVPDAVLTAARQKLTELEQGDGG
PPQLPLFAAPPAEPPPQPAMDGPERAVLEEIEGLDPDALTPRDAHALLYRLRALAKPHER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPISAL_05730 YP_008046705.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 59