Gene Information

Name : AHML_02915 (AHML_02915)
Accession : YP_008041715.1
Strain : Aeromonas hydrophila ML09-119
Genome accession: NC_021290
Putative virulence/resistance : Virulence
Product : general secretory pathway protein E
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 641978 - 643483 bp
Length : 1506 bp
Strand : +
Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

DNA sequence :
ATGGCGGCATACCAGCTGGATGGCGTTGACATGCCGGCAGCCCTGCCCGAGCTGCCGTTTGCCTTCGCCCGCAACTTCGG
GGTGATCCTGACCGAGCGGCAGGGGGCCCCGGTGCTGCTCTGCCGCCAGGGCGTGACGCCGCAAACCCTGCTGGAAGTAC
GGCGGGTGGCGGGCTGCGCCTTCACGGTGGAGCAGATGGACGGCGAAGCCTTCGAAGAGCTGCTGATGGCCCACTACCAG
CGCGACTCCTCCGAGGCGCGCCAGCTGATGGAGGATCTCGGCAACGAGATGGACTTCTTCGCGCTGGCCGAAGAGCTGCC
CCAGAGTGAAGACCTGCTGGATGCCGACGACGACGCCCCCATCATCCGCCTCATCAACGCCATGTTGAGTGAGGCGATCA
AAGAAGAGGCGTCCGACATCCACATCGAAACCTTCGAGCGGGCCCTGGTGATCCGTTTTCGCATCGATGGGGTGCTGCGG
GAGATCCTGCGGCCCCATCGCAAGCTCGCCTCCTTGCTGGTGTCGCGCATCAAGGTCATGTCGCGGATGGACATCGCCGA
GAAGCGGGTGCCGCAGGATGGCCGCATCTCGTTGCGCATCGGCGGCCGGGCGGTGGACGTGCGGGTTTCCACCATGCCGT
CCAGCTACGGCGAGCGGGTGGTGCTGCGTCTTCTCGACAAGAACAACGTGCGGCTCGAGCTCAAGCAGCTCGGCATGACG
CTGGCCAACCGCAACATCATCAGCGAACTCATTCGCAAGCCTCACGGCATCATTCTGGTGACGGGCCCGACCGGTTCGGG
CAAGTCGACCACCCTCTACGCGGCTCTCTCCGAGATCAACTCGCGGGATCGCAACATCCTGACTGTCGAAGACCCCATCG
AATATGACCTCGAAGGGGTGGGCCAGACCCAGGTCAACAGCAAGGTGGATATGACCTTCGCCCGCGGCCTGCGCGCCATT
CTGCGCCAAGACCCGGACGTGGTGATGGTGGGGGAAATCCGTGACCTCGAGACCGCCCAGATCGCGGTGCAGGCGTCATT
GACCGGTCACCTGGTGATGTCGACCCTGCACACCAACACCGCCATCGGTGCCATCACCCGGATGCGGGACATGGGCATCG
AGCCCTTCCTGCTCTCCTCCTCACTGCTGGCGGTACTGGCCCAGCGGCTGGTGCGCACCCTCTGCCCCGATTGCCGCGCG
CCGCGCCCCATCACCGAGCAGGAGCGCATTGCCATGGGCATCGAGCTGGCGCCGGATCAGCAGGTGTGGCGGCCGGTGGG
CTGCGAGCAGTGCAACCACACCGGCTATCGCGGCCGGACCGGCATCCACGAGCTGGTGGTGATCGACGAAGCGGTGCGTG
AGGCGATCCACAGCGCCAGCGGCGAGCTGGCCATCGAGCGGCTGATCCGGGGTCACACCCCCAGCATCCGCCGCGACGGC
ATCGACAAGGTACTCAAGGGGCAGACCAGCCTCGAAGAGGTGCTGCGCGTGACCCGGGAAGACTGA

Protein sequence :
MAAYQLDGVDMPAALPELPFAFARNFGVILTERQGAPVLLCRQGVTPQTLLEVRRVAGCAFTVEQMDGEAFEELLMAHYQ
RDSSEARQLMEDLGNEMDFFALAEELPQSEDLLDADDDAPIIRLINAMLSEAIKEEASDIHIETFERALVIRFRIDGVLR
EILRPHRKLASLLVSRIKVMSRMDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSYGERVVLRLLDKNNVRLELKQLGMT
LANRNIISELIRKPHGIILVTGPTGSGKSTTLYAALSEINSRDRNILTVEDPIEYDLEGVGQTQVNSKVDMTFARGLRAI
LRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAIGAITRMRDMGIEPFLLSSSLLAVLAQRLVRTLCPDCRA
PRPITEQERIAMGIELAPDQQVWRPVGCEQCNHTGYRGRTGIHELVVIDEAVREAIHSASGELAIERLIRGHTPSIRRDG
IDKVLKGQTSLEEVLRVTRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 8e-142 69
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-142 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AHML_02915 YP_008041715.1 general secretory pathway protein E VFG2048 Protein 5e-139 68
AHML_02915 YP_008041715.1 general secretory pathway protein E VFG0182 Protein 2e-133 66
AHML_02915 YP_008041715.1 general secretory pathway protein E VFG1876 Protein 4e-121 57
AHML_02915 YP_008041715.1 general secretory pathway protein E VFG2426 Protein 5e-71 47