Gene Information

Name : AHML_02680 (AHML_02680)
Accession : YP_008041668.1
Strain : Aeromonas hydrophila ML09-119
Genome accession: NC_021290
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 592819 - 593550 bp
Length : 732 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence :
ATGAAAAAGCTGCTCTCTTATACCTGTCTGGCCGTGCTGGGCATGACCTCGCTCAACGTCAGCGCTGCCATCGTGCTGGA
CCGTACTCGTGTCGTCTATCCGGGCGGTGCCAAGTCCATCAGTCTCAACATCAAGAACGAGAACCAGAAGCTGCCCTACC
TGGCGCAGTCCTGGATTGAAGATGCCCAGGGCCAGAAGATCGCATCTCCCTTCGCGGTACTGCCACCGGTACAGCGAGTG
GATGCGAACCAGAAGTCCATCGTGCGGATCGCCAGCGTGCCGGCCATCGACAGCCTGCCCAAGGATCGCGAGTCCATCTA
CTACTTCAATCTGCGCGAGATCCCGCCCAAGAGCGAGAAGAGCAACGTGATGCAGATTGCCGTGCAGTCCAAGATCAAGC
TGTTCTACCGCCCCGAGGCCATCCTGCCCGAGCGCGGAGCCATCTGGCAGGATCAGGTGCTGATCACCAAGCAGGGCAAG
GCCCTCAAGGTCAACAACCCGACTCCTTACTACATCACCTACGTGGGCCTCGGCCATCCGCAGGGCAAAGGGAGAACCGC
GATGAAGGGCTTCTCGGCCTTTATGGTTGCCCCCAAGTCAGAGCAGACGGTCACCATCCCGGAAACCCTGGGCAATGAAT
TTGTGATCAGCTACGTCAATGACTACGGCGGATATATGGATATCAAATACCAGTGCACAGGCAATGCCTGTAAAGCCATC
AAGAGCGAGTAA

Protein sequence :
MKKLLSYTCLAVLGMTSLNVSAAIVLDRTRVVYPGGAKSISLNIKNENQKLPYLAQSWIEDAQGQKIASPFAVLPPVQRV
DANQKSIVRIASVPAIDSLPKDRESIYYFNLREIPPKSEKSNVMQIAVQSKIKLFYRPEAILPERGAIWQDQVLITKQGK
ALKVNNPTPYYITYVGLGHPQGKGRTAMKGFSAFMVAPKSEQTVTIPETLGNEFVISYVNDYGGYMDIKYQCTGNACKAI
KSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 2e-46 48
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 2e-52 48
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 2e-52 48
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 2e-52 48
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 3e-52 48
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 2e-52 48
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 2e-52 48
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 4e-56 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AHML_02680 YP_008041668.1 fimbrial chaperone protein VFG0885 Protein 1e-46 48
AHML_02680 YP_008041668.1 fimbrial chaperone protein VFG1547 Protein 1e-52 48
AHML_02680 YP_008041668.1 fimbrial chaperone protein VFG0896 Protein 1e-52 48