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Name : AHML_02675 (AHML_02675) Accession : YP_008041667.1 Strain : Aeromonas hydrophila ML09-119 Genome accession: NC_021290 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 590322 - 592808 bp Length : 2487 bp Strand : + Note : COG3188 P pilus assembly protein, porin PapC DNA sequence : ATGGTTTTCATGCTATGCGTGCCCGGCCTGATGGCGGTGGCAAATCACGCATGGGCAGAAACGGAGTTTAATATTGATGC GCTCGATCTGGACGAACGGACCAAGATCGACCTCTCCCAGTTTGCCGACGAAGGTTATATCCTGCCCGGCGACTACTACC TCGAGATCGAGGTCAACAAGAACAAGCTGCCCCTGCAGAAGATCCCTTTCTACGAGACCGATACCGGCAAGGGAAAGGGT GGGGTGGCCTGCCTGCCGCAAGAAGTGATCCCCAAGCTGGCGCTGACCGACGAGGCCATCGCCAAGATCGATACCTGGCA CGACGGCCAGTGTGCCAACCTGCTGGCGCTGGACGGCGTGGTGATCGCGAACGACATAGGTAACGGCTTGCTGCGCATCG CCGTGCCCCAGGCGTGGATGAAGTACAGCGATCCCAACTGGATTCCGCCCGAACAGTGGGATGAAGGGATCCCGGGGATG ATGCTGGATTACAACATCAACGCCCAGGTCAACGAAGGGGATGGTTACTCCAACCGCAACATCAGCAGCTACGGTACGCT GGGGTTCAACTATGGCGCCTGGCGCCTGCGGGGCGACTACCAGGCCAATGCCTACTGGGGTGACAACGAGCGGACCACTT CCGAGCTGAACCGCATCTATGCCTATCGTCCGCTGCCAAACATGGCTGCCAAGCTGACGGTGGGCGAGCAGCAGCTCAAC TCCCAGCTGATCGACGGCTTCCGCTATACCGGCGTCAACCTGGCCAATGACGAGCGCATGCTGCCGCCGAGCCTGCAGGG CTATGCGCCGGAAGTAAGCGGCATCGCCAAGACCAACGCCAAGGTCACCATCTCCCAGTCCGGCCGCATCCTCTATGAGA CCAACGTGCCGGCCGGTCCGTTTCGCATCCAGGGGCTGGACAGCTCGGTACGCGGCCGCCTCGACGTACGGGTGGAGGAG CAGGATGGCAGCGTCAACTCGTTCCAGGTCGACACCGCGACCGTCCCCTATCTGACTCGCCCCGGCTACGTCCGATACAA CCTGGCGGTCGGTGCCCCTTCCGAACAGACTGATTCGGTTCATGATGTGCACGGTCCGGCCTTTGTGACCGGTGATTTCT CCTGGGGGGTGGCCAACTCCTGGTCGCTGTACGGTGGCAGCCTGGTTGCGGGTGAATACAACTCCATGGGGCTGGGTATC GGTCGCGATCTCTATGCCTTCGGCGCCATCTCCGCCGACCTGACTCAATCCATTGCCAAGCTGCCGGGCCTGTCGACCAA GATTGGCCAGTCGGTGCGGGTGAACTACGCCAAGCAGTTTGATGAATACAACAGCTCGATCACCTTCGCCGGTTATCGCT TCTCCCAGCACAACTTCATGACCATGTCGCAGTTCCTGAGCAACAAGGAGCGGCTGGAGAAGAACGAAACGACCTCGAGC GATGACTACAACACCTGGGGTGACAAGGAGCTCTACACCATCACCGCCAACAAGACCTTCTGGGCGGAGGATGCGGCCAA GGCGCTGACCGTCTATCTGGACTACACCCACAGAACTTATTGGGAGCACGATGCCGAGGATCGCTACGGCCTCACCATCA ACAAGAACGTGAACATCGGCAGCTTCAAGGATGTCTCCGTCTATGTGTCGGCCTACAAGACCAAGACCGAGAACTACGAG GATGACAAGAGCGTCATGCTGACCCTGAGCATGCCGATCGGGGACAGAAAGAGCGCGGGATACAGCGTGCAGTCCTCCAA TGGCAAGATCACCCATCTGGCCACCTATCAGGATTACAGCCGGCCGGATGATACCTATCAGCTGGGGGCGGGCGTGCAGA GCAACGGCCATGCCGTGGCGCGGGGCTACTACAACCACAACAGCGACATCGGGGCGGTCAGCCTCAATGCCTACAGCGTG CAGAGCGAATACACCTCGGTCGGCGCCAGCCTGCGTGGCGGTCTGACGGCGACCCAGCACGGTGCAGCCCTGCACCAGGC GACCCGTCGTGGCGGTACCCGCATGATGGTGGATACCGACAAGACCTCCGGCGTCTCCTTCAACAATGGCCGCGCCGTGA CCAACCGCTTTGGCGTCGCGGTGATCAGCGACATGACTGACTATCGCAAGAGCGACACCCGGGTGGATGTGGATCAGCTG AGCGATGACATCGATGCGATGAACGCCATCAAGCAGGGGACCCTGACCGAGGGCGCAATTGGGTATAATGCCTTCGAAAT GGCCGAAGGATTCAAGCTGCTGGCCAACGTCAAACTGCCTGATGGCTCAGTGCCGCCGTTTGGCGCCACCGTCGTCAAGG GTTCCGGCCGGGTGCTCTCGGTGGTGGATGAAGATGGCCTGGTCTATCTGACCGGGGTGAAACCGAATGAAGCGTTTGAA CTCTCCTGGGGCGGCGCCCGCCAGTGCAAGATAGTGGCACCGCAACAAGTAACCGATCTGTCGATGAAGACTCTCACTTG CAAGTAA Protein sequence : MVFMLCVPGLMAVANHAWAETEFNIDALDLDERTKIDLSQFADEGYILPGDYYLEIEVNKNKLPLQKIPFYETDTGKGKG GVACLPQEVIPKLALTDEAIAKIDTWHDGQCANLLALDGVVIANDIGNGLLRIAVPQAWMKYSDPNWIPPEQWDEGIPGM MLDYNINAQVNEGDGYSNRNISSYGTLGFNYGAWRLRGDYQANAYWGDNERTTSELNRIYAYRPLPNMAAKLTVGEQQLN SQLIDGFRYTGVNLANDERMLPPSLQGYAPEVSGIAKTNAKVTISQSGRILYETNVPAGPFRIQGLDSSVRGRLDVRVEE QDGSVNSFQVDTATVPYLTRPGYVRYNLAVGAPSEQTDSVHDVHGPAFVTGDFSWGVANSWSLYGGSLVAGEYNSMGLGI GRDLYAFGAISADLTQSIAKLPGLSTKIGQSVRVNYAKQFDEYNSSITFAGYRFSQHNFMTMSQFLSNKERLEKNETTSS DDYNTWGDKELYTITANKTFWAEDAAKALTVYLDYTHRTYWEHDAEDRYGLTINKNVNIGSFKDVSVYVSAYKTKTENYE DDKSVMLTLSMPIGDRKSAGYSVQSSNGKITHLATYQDYSRPDDTYQLGAGVQSNGHAVARGYYNHNSDIGAVSLNAYSV QSEYTSVGASLRGGLTATQHGAALHQATRRGGTRMMVDTDKTSGVSFNNGRAVTNRFGVAVISDMTDYRKSDTRVDVDQL SDDIDAMNAIKQGTLTEGAIGYNAFEMAEGFKLLANVKLPDGSVPPFGATVVKGSGRVLSVVDEDGLVYLTGVKPNEAFE LSWGGARQCKIVAPQQVTDLSMKTLTCK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 3e-164 | 45 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 1e-158 | 44 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 1e-158 | 44 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 1e-158 | 44 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 1e-158 | 44 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 6e-157 | 43 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 4e-157 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AHML_02675 | YP_008041667.1 | outer membrane usher protein | VFG1548 | Protein | 6e-159 | 44 |
| AHML_02675 | YP_008041667.1 | outer membrane usher protein | VFG0884 | Protein | 5e-159 | 44 |
| AHML_02675 | YP_008041667.1 | outer membrane usher protein | VFG0895 | Protein | 6e-159 | 44 |
