Gene Information

Name : AHML_02170 (AHML_02170)
Accession : YP_008041566.1
Strain : Aeromonas hydrophila ML09-119
Genome accession: NC_021290
Putative virulence/resistance : Virulence
Product : periplasmic fimbrial chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 480719 - 481462 bp
Length : 744 bp
Strand : -
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence :
ATGAAACTGATGCAACACGCCCTGCTGGCCTTCGCCCTGGTGGCCGCCCTGCCCACTCAGGCCGCCGTGGCCCTGGATCG
CACCCGGGTGATCTACACCGGCGATAGCAAGTCCCAGAGCCTCAACATCCGCAACCACAACAAGGAGCTGCCCTATCTGG
CCCAGGCCTGGATGGAAGATGCCATGGGCCGCAAGATTTCAAGCCCCTTCGTGGTGCTGCCCCCGGTGCAGCGGCTGGAG
CCGGGCGCCGACAGCATGCTGAAGGTGCAGGCCACCCAGGCGAGCCACCTGCTGCCCCAGGATCGGGAGAGCCTGTTCTA
CTTCAACCTGCGGGAGATCCCGCCGCGCAGCGACAAACCCAACTCCCTGCAGCTGGCGCTGCAGACCCGCATCAAGTTCT
TCTACCGGCCGCAGTCGCTGGTGGTGGAGCCGGAGGCCCATGTCGCCCCCTGGCAGCAGCAGCTCAAGCTGACCCCGACC
CAGGGGCACTACCGGGTGGAGAACCCCACCCCCTACTTCATCACCCTGGTCGATGCCGCCGGCAAGGCCGATGACGAAGG
GCAGGCCGACTTCACCCCCCTGATGCTGGCCCCGTTTGGCCAGGGTGAGCTCAATCTCGGGGTCGCCCGGCTCGGCAACA
CGCCGACCCTCACCTATGTCGATGACTTCGGCGGGCGCCGCCCGCTCCACTTTCGCTGCACCGATCAGCACTGCAGCCTG
ACCAGCGCCGACAAAGCGGCCTGA

Protein sequence :
MKLMQHALLAFALVAALPTQAAVALDRTRVIYTGDSKSQSLNIRNHNKELPYLAQAWMEDAMGRKISSPFVVLPPVQRLE
PGADSMLKVQATQASHLLPQDRESLFYFNLREIPPRSDKPNSLQLALQTRIKFFYRPQSLVVEPEAHVAPWQQQLKLTPT
QGHYRVENPTPYFITLVDAAGKADDEGQADFTPLMLAPFGQGELNLGVARLGNTPTLTYVDDFGGRRPLHFRCTDQHCSL
TSADKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 4e-57 52
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 5e-55 50
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 1e-54 50
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 1e-54 50
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 9e-55 50
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 7e-55 50
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 7e-55 50
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 1e-48 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AHML_02170 YP_008041566.1 periplasmic fimbrial chaperone VFG1547 Protein 3e-55 50
AHML_02170 YP_008041566.1 periplasmic fimbrial chaperone VFG0896 Protein 4e-55 50
AHML_02170 YP_008041566.1 periplasmic fimbrial chaperone VFG0885 Protein 4e-49 49