Gene Information

Name : AHML_00165 (AHML_00165)
Accession : YP_008041165.1
Strain : Aeromonas hydrophila ML09-119
Genome accession: NC_021290
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 40662 - 41327 bp
Length : 666 bp
Strand : -
Note : COG0110 Acetyltransferase (isoleucine patch superfamily)

DNA sequence :
ATGGAAAATCCGTTCGGTAGCTGGCTGGAATCCCAGGTCATACGGGATCATCTGACCAACCCCAATATCGAGGCCGGGGA
ATACAGCTATTACTCCGGCTACTACCACGGCAAGCCGTTCGAGGATCATTGCGTACGCTACCTGCTCGGCGATGGTTCGA
CGCGGGAGTCCTGGGACAGTGGCCAGTGGGGTAAGGAAGTTGACCGCCTGATCATCGGCAAGTTCTGCTCCATCGCCTCC
GGCGCCACCTTCATGCTGGCGGGCAACCAGGGTCACCGGCTGGACTGGGTTTCCACCTTCCCCTTCGATGCTGCCCGCTT
CGGTGACGGCGTGCAGGACGGTTTTCTGCGCAAGGGAGACACCCGGATCGGCAACGACGTCTGGATCGGCTCGGAAGCGA
TGATCATGCCCGGCATCACCATCGGTGATGGTGCCGTCATCGCCACTCGTGCCGTGGTGACCAAGAATGTGGCCCCTTAC
ACCATAGTCGGCGGCAACCCGGCCCAGCCTATCCGACGTCGCTTCGGCGAGGAGCAGATTGCCATGCTGCAGGAGATGCA
GTGGTGGGACTGGCCGCTGCAGCACCTGCAGGCGGCCATGCCGCTACTCTGTTCGGGCGATATTCAGGCCCTTTACCGAC
ACTGGCAGCAGGAGTGCACATCATGA

Protein sequence :
MENPFGSWLESQVIRDHLTNPNIEAGEYSYYSGYYHGKPFEDHCVRYLLGDGSTRESWDSGQWGKEVDRLIIGKFCSIAS
GATFMLAGNQGHRLDWVSTFPFDAARFGDGVQDGFLRKGDTRIGNDVWIGSEAMIMPGITIGDGAVIATRAVVTKNVAPY
TIVGGNPAQPIRRRFGEEQIAMLQEMQWWDWPLQHLQAAMPLLCSGDIQALYRHWQQECTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 1e-49 55
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 2e-48 53
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 2e-48 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AHML_00165 YP_008041165.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 1e-48 55
AHML_00165 YP_008041165.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 5e-50 55
AHML_00165 YP_008041165.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 1e-49 55
AHML_00165 YP_008041165.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 1e-48 53
AHML_00165 YP_008041165.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 1e-48 53
AHML_00165 YP_008041165.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 1e-45 49
AHML_00165 YP_008041165.1 chloramphenicol acetyltransferase NC_011595.7057349.p0 Protein 7e-27 45
AHML_00165 YP_008041165.1 chloramphenicol acetyltransferase NC_010410.6000796.p0 Protein 7e-27 45
AHML_00165 YP_008041165.1 chloramphenicol acetyltransferase NC_011586.7045146.p0 Protein 6e-27 42