|
Name : AHML_06995 (AHML_06995) Accession : YP_008042530.1 Strain : Aeromonas hydrophila ML09-119 Genome accession: NC_021290 Putative virulence/resistance : Virulence Product : DNA repair protein RadC Function : - COG functional category : - COG ID : - EC number : - Position : 1539348 - 1539845 bp Length : 498 bp Strand : - Note : COG2003 DNA repair proteins DNA sequence : ATGCGTTACCACAAACTGAAAGCCGGGGAATGCCCCGGCACCTATGTCGTCACCGAACCGGTGACCGAGCAAGACCTGCT GCGTATTGCCAATCAGATTGCCCGTAAACGCCTGGCCAAAGGCACTGCCATTACCAGTACCACTGAGGCCGCCGAGCGGC TGCAAACCCTGCTGCAGGACCGGGAGCATGAAGTGTTTGGGGCACTGTTCCTCGACTCCCAGCATCGCGTACTGGCTTTT GAGGAGCTGTTTCGTGGCACCTTGGACAGTGCCAGCATCTACCCACGGGAAGTGGTCAAGCGGGCCTTGCTGCTTAACAG CGGGGCCATTATCGCGGTGCACAATCACCCCAGTGGTGACCCGGAACCCAGCTACTCTGACCGGGTCTTTACCCAAGCCC TCAAAGAGGCCTTGGCGCTGGTGGATGTCCGGTTGCTTGACCATCTGGTGGTCGGTGCTGAGGGCGTGGTATCCCTGAAA GAGAGAGGTCAGCTATGA Protein sequence : MRYHKLKAGECPGTYVVTEPVTEQDLLRIANQIARKRLAKGTAITSTTEAAERLQTLLQDREHEVFGALFLDSQHRVLAF EELFRGTLDSASIYPREVVKRALLLNSGAIIAVHNHPSGDPEPSYSDRVFTQALKEALALVDVRLLDHLVVGAEGVVSLK ERGQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1786 | NP_231421.1 | DNA repair protein RadC | Not tested | VPI-2 | Protein | 1e-23 | 50 |
| VC0395_A1383 | YP_001217326.1 | DNA repair protein RadC | Not tested | VPI-2 | Protein | 1e-23 | 50 |
| VPI2_0034 | ACA01849.1 | DNA repair protein RadC | Not tested | VPI-2 | Protein | 7e-24 | 50 |
| unnamed | AAK00479.1 | unknown | Not tested | SHI-1 | Protein | 8e-14 | 45 |
| yeeS | NP_838484.1 | RADC family DNA repair protein | Not tested | SHI-1 | Protein | 1e-13 | 45 |
| yeeS | CAE85201.1 | YeeS protein | Not tested | PAI V 536 | Protein | 7e-14 | 45 |
| yeeS | NP_708770.1 | RADC family DNA repair protein | Not tested | SHI-1 | Protein | 1e-13 | 45 |
| z1217 | CAD33787.1 | Z1217 protein | Not tested | PAI I 536 | Protein | 6e-14 | 44 |
| Z1217 | NP_286752.1 | RadC family DNA repair protein | Not tested | TAI | Protein | 1e-13 | 44 |
| yeeS | ADD91702.1 | YeeS | Not tested | PAI-I AL862 | Protein | 7e-14 | 44 |
| yeeS | CAI43901.1 | YeeS protein | Not tested | LEE | Protein | 6e-14 | 44 |
| aec73 | AAW51756.1 | Aec73 | Not tested | AGI-3 | Protein | 8e-14 | 44 |
| unnamed | AAL08475.1 | unknown | Not tested | SRL | Protein | 7e-14 | 44 |
| yeeS | CAI43846.1 | YeeS protein | Not tested | LEE | Protein | 7e-14 | 44 |
| VC0510 | NP_230161.1 | DNA repair protein RadC-like protein | Not tested | VSP-2 | Protein | 1e-18 | 44 |
| Z1657 | NP_287160.1 | RadC family DNA repair protein | Not tested | TAI | Protein | 3e-13 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AHML_06995 | YP_008042530.1 | DNA repair protein RadC | VFG1119 | Protein | 3e-24 | 50 |
| AHML_06995 | YP_008042530.1 | DNA repair protein RadC | VFG0660 | Protein | 3e-14 | 45 |
| AHML_06995 | YP_008042530.1 | DNA repair protein RadC | VFG1528 | Protein | 2e-14 | 44 |
| AHML_06995 | YP_008042530.1 | DNA repair protein RadC | VFG1066 | Protein | 3e-14 | 44 |
