Gene Information

Name : fliI (BRPE64_ACDS27030)
Accession : YP_008038853.1
Strain :
Genome accession: NC_021287
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2806148 - 2807707 bp
Length : 1560 bp
Strand : +
Note : -

DNA sequence :
GTGGTGAACATCCAAGCAGGCAGCCAGGCGCATCGCATCACGCAGGACGGGTTGAGCGCGCTCGAACAGGAACTGGCGCG
CGCATCGTTCGGCCCGCTCGCCGCCCATGACAGCACCGACGACACCGCCGCCGACGAAGCCCCCGACGAACTCGCCGCCC
GCACGATCGCCGAACTTGCCGATATCGCCGGCAATCCGCACATCGACGCGTGGCGCGCCAAGCTCGACGCCCTCAAAACG
CGCAGCGAACTCGCCAAGCCGCTGCGTTCGTGCGGGCGTCTGACGCGCGCCGCCGGCCTTGTGCTGGAAGCGGTCGGCCT
GAAGATGGGCGTCGGCTCCGAATGCATGATCGAGCTGCCGCCGGGCAGCGCGATTCCGACCGCCGAGGCGGAAGTCGTCG
GCTTCTCGGGCGACAAGCTTTTTCTGATGCCGACCACCGAAGTGGCCGGCCTTCTGCCCGGCGCGCGCGTCTATCCGCTC
GAAAGCGCGCCGATCAACGATCCGATGGCGGGCGCGAAGCGCTTGCCCGTCGGCTGGGAAATGCTCGGGCGCGTGGTCGA
TGCGTCGGGCCGTCCGCTCGACGGCCTGGGCCCGCTCGGTGCGAAAGTCGACGCGCCGCTGTCCGCGCCGGTCATCAATC
CGCTGAACCGCGAGCCGATTCACAAGGTGCTCGATGTCGGCGTGCGCGCGATCAACACGCTCCTGACTGTGGGACGCGGC
CAGCGCATGGGCCTGTTCGCGGGCTCGGGCGTCGGCAAGTCGGTGCTGCTCGGCACGATGGCGCGCTACACGAGCGCGGA
AGTCATCGTGATCGGGCTGATCGGCGAACGCGGCCGCGAAGTGAAGGAATTCATCGAGCAGATTCTGGGCGAGGACGGGC
TCGCGCGCTCGGTGGTGGTTGCGGCGCCGGCGGACGTGTCGCCCGTGCTGCGCATGCAGGCCGCCGCGTACACGACTTCG
CTCGCCGAATATTTCCGCGATCAGGGCAAGCACGTTCTGATGCTGATGGATTCGCTCACGCGCTACGCGATGGCGCAGCG
CGAGATTGCGCTTGCGATCGGCGAGCCGCCCGCGACCAAAGGCTATCCGCCGTCGGTGTTCGCGAAGCTGCCGGCGCTCG
TCGAGCGTACCGGCAACGGTCCGGAAGGCGGCGGCTCGATCACCGCGTTCTACACCGTGCTCACCGAAGGCGACGATCAG
CAGGACCCGATCGCCGACTCGGCGCGCGCGATTCTCGACGGCCATATCGTGCTGAACCGCTCGCTGGCGGAGGCGGGGCA
CTATCCGGCTATCGATATCGAACAGTCGATCAGCCGCGCGATGACCGCGCTCATCGACGACAAACATCTCGAACGCGTGC
GCCTGTTCAAGCAGATGCTGTCGCGTTATCAGCGCAACAAGGATCTGATCAACGTAGGCGCGTATTCGAGCGGCCGCGAC
GCGCTGCTCGACCGCGCGATTGCGCTGTATCCGCGCATGGAGTCGTTTTTGCAGCAGGGGTTTCGCGAGCAGGCGCCGTT
CGAGCCGAGCATCGCGATGTTGAATCAACTGTTCGAATAG

Protein sequence :
MVNIQAGSQAHRITQDGLSALEQELARASFGPLAAHDSTDDTAADEAPDELAARTIAELADIAGNPHIDAWRAKLDALKT
RSELAKPLRSCGRLTRAAGLVLEAVGLKMGVGSECMIELPPGSAIPTAEAEVVGFSGDKLFLMPTTEVAGLLPGARVYPL
ESAPINDPMAGAKRLPVGWEMLGRVVDASGRPLDGLGPLGAKVDAPLSAPVINPLNREPIHKVLDVGVRAINTLLTVGRG
QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPVLRMQAAAYTTS
LAEYFRDQGKHVLMLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQ
QDPIADSARAILDGHIVLNRSLAEAGHYPAIDIEQSISRAMTALIDDKHLERVRLFKQMLSRYQRNKDLINVGAYSSGRD
ALLDRAIALYPRMESFLQQGFREQAPFEPSIAMLNQLFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-72 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 5e-64 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-64 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-64 47
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-64 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-64 47
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-73 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-73 46
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-74 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-74 46
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-74 46
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 9e-75 46
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-75 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 6e-75 46
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 6e-75 46
unnamed AAL06369.1 EscN Virulence LEE Protein 4e-68 46
escN CAI43874.1 EscN protein Virulence LEE Protein 6e-68 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 9e-68 45
escN AAK26715.1 EscN Virulence LEE Protein 6e-68 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 6e-68 45
escN AAL57542.1 EscN Virulence LEE Protein 6e-68 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 5e-68 45
escN AAC38383.1 EscN Virulence LEE Protein 1e-67 45
escN AAC31513.1 L0034 Virulence LEE Protein 8e-68 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-67 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 8e-68 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-67 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 8e-68 45
lscN AAO18044.1 LscN Virulence TTSS locus Protein 4e-73 44
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-66 44
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-66 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-60 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-57 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-57 42
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-60 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-65 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 4e-64 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 4e-64 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-63 41
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 8e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_008038853.1 flagellar protein export ATPase FliI VFG2499 Protein 0.0 86
fliI YP_008038853.1 flagellar protein export ATPase FliI VFG2331 Protein 1e-137 68
fliI YP_008038853.1 flagellar protein export ATPase FliI VFG1254 Protein 3e-118 63
fliI YP_008038853.1 flagellar protein export ATPase FliI VFG0515 Protein 3e-64 47
fliI YP_008038853.1 flagellar protein export ATPase FliI VFG0192 Protein 5e-77 46
fliI YP_008038853.1 flagellar protein export ATPase FliI VFG2144 Protein 3e-76 45
fliI YP_008038853.1 flagellar protein export ATPase FliI VFG0048 Protein 2e-75 45
fliI YP_008038853.1 flagellar protein export ATPase FliI VFG0730 Protein 6e-68 45
fliI YP_008038853.1 flagellar protein export ATPase FliI VFG0812 Protein 5e-68 45
fliI YP_008038853.1 flagellar protein export ATPase FliI VFG0390 Protein 3e-74 44
fliI YP_008038853.1 flagellar protein export ATPase FliI VFG1008 Protein 2e-60 41