|
Name : lysS (K734_04130) Accession : YP_008034325.1 Strain : Idiomarina loihiensis GSL 199 Genome accession: NC_021286 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 877255 - 878766 bp Length : 1512 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGACTGATAAATCGCAGGCACCTGAAGTAGACGTAAACGAACAGATCGCGCAGCGAAAGGCGAAACTGTCGGCGCTTCG CGATAAGGGTATCGCATTCCCGAACGATTTCCGTCGGGACTCGTTAGCTGCTGACTTACACGCTGAATACGATAATCTGA GCAAAGAAGAGCTGGCGGAAAAAGGCATTCGCGTGAAAGTTGCCGGCCGTATGATGACCCGCCGTATTATGGGGAAAGCC AGTTTCGCAACCATCCAGGATATGAGCGGCAAAATTCAACTGTATGTTGCCCGCGACAATCTGCCTGAAGGTTATTACAA CACGGAATTTAAAAAATGGGATTTAGGCGATATTCTCGGCGCCTCTGGCACCTTGTTTATTACCGGAACCGGTGAGTTAA GCGTGCAAGTTGACGAAGTACGTTTGCTGACTAAAGCACTGCGTCCTTTGCCGGATAAATTCCATGGCTTGTCAGATCAG GAAATGCGCTATCGTCAGCGTTATCTGGACCTGATTACCAACGAAGAGTCTCGCAGTACTTTCATGGCTCGCTCTAAAAT CATTGACTATATTCGTCGTTTTTTAAGTGACCGTCAGTTTCTGGAAGTTGAAACTCCTATGATGCAGGCGATTCCGGGCG GCGCCGCAGCTCGTCCTTTCAGCACGCACCATAACGCACTGGATATGGAACTGTTTTTACGTATTGCACCAGAACTTTAC CTGAAACGTTTAGTCGTTGGTGGTTTTGAGAAGGTGTTCGAAATTAACCGTAATTTCCGTAATGAAGGCCTGTCAACGCG CCACAACCCTGAGTTCACTATGTTGGAGTTCTACTGGGCGTACGCGGATTATCACGACTTAATGGATTTAACCGAGCAGA TGTTACGTGGTGCGGCTGAGTCGGTCTTAGGCTCTGCTCAGTTTACCAGCCAGGGCGTGGATTATGATTTCGGTAAGCCG TTTGAGCGCATGACAGTGTTGGAAGCTATTGTTAAGTACATGCCGGAAGTGAGCCTTGAGCAGCTTAATGACATGAATAC AGCAACTGAAATTGCCGAGCAGGTTGGTGTCAGTGTTAAGCCGTCATGGGGCTTAGGTAAAGTTCAGATCGAAATTTTTG AGACTGTTGCTGAGCATCGTTTAATTCAGCCTACCTTTATTACTGCGTACCCGGCTGAAGTTTCACCGTTGGCTCGTCGT CACGACGACAATCCGTTTGTGACTGATCGTTTTGAATTTTTTGCCGGTGGTCGTGAGTTGGCGAATGGTTTCTCGGAGCT TAACGATGCTGAAGATCAGGCTGAACGTTTTCGCGAGCAAGTTGAACAGAAAGAAGCGGGCGATGATGAAGCCATGTTCT ACGACGAAGATTATGTCACCGCACTGGAACACGGTATGCCGCCAACAGCCGGTCAGGGCATTGGTATTGACCGTCTGGTA ATGTTGCTAACGGATTCTGCGTCTATTCGCGACGTATTATTGTTCCCGCATATGCGCCCAAAAGCGGATTAA Protein sequence : MTDKSQAPEVDVNEQIAQRKAKLSALRDKGIAFPNDFRRDSLAADLHAEYDNLSKEELAEKGIRVKVAGRMMTRRIMGKA SFATIQDMSGKIQLYVARDNLPEGYYNTEFKKWDLGDILGASGTLFITGTGELSVQVDEVRLLTKALRPLPDKFHGLSDQ EMRYRQRYLDLITNEESRSTFMARSKIIDYIRRFLSDRQFLEVETPMMQAIPGGAAARPFSTHHNALDMELFLRIAPELY LKRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMLEFYWAYADYHDLMDLTEQMLRGAAESVLGSAQFTSQGVDYDFGKP FERMTVLEAIVKYMPEVSLEQLNDMNTATEIAEQVGVSVKPSWGLGKVQIEIFETVAEHRLIQPTFITAYPAEVSPLARR HDDNPFVTDRFEFFAGGRELANGFSELNDAEDQAERFREQVEQKEAGDDEAMFYDEDYVTALEHGMPPTAGQGIGIDRLV MLLTDSASIRDVLLFPHMRPKAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-155 | 61 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-88 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008034325.1 | lysyl-tRNA ligase | VFG1668 | Protein | 3e-155 | 61 |
