Gene Information

Name : hemC (K734_12870)
Accession : YP_008036067.1
Strain : Idiomarina loihiensis GSL 199
Genome accession: NC_021286
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 2741910 - 2742851 bp
Length : 942 bp
Strand : +
Note : COG0181 Porphobilinogen deaminase

DNA sequence :
ATGACCCAACGCGTTAGAATTGCAACACGCAAAAGCAAGCTGGCTTTATGGCAGGCTGAACACATTCAACAACGCCTTGA
AGAGCTGCATCCGGGCCTGTCGGTAGAGCTGGTTCCTATGTCTACCAAGGGCGATGTCATTCTGGATACCCCGCTGGCAA
AAATTGGCGGTAAAGGCTTGTTCGTAAAAGAACTGGAAGTGGCGATGCTGGAAGGCCGTGCTGATATTGCCGTACACAGC
ATGAAAGACTTACCGGTTGAGTTCCCGCCGGGGCTGGAGCTTCACACCATTTGCGAACGCGAAGATCCGCGCGATGCTTT
TGTATCCAACAACTACAAAAACCTTAATGAGCTGCCGGAAGGCGCAGTAGTCGGAACCTGTAGTTTACGTCGCCGCTGCC
AGGTAAAAGAGCAGTTTCCACATTTAGTCATAAAAGATTTACGCGGCAACGTTCAAACACGTTTACGCAAACTGGATGAA
GGTGAATTTGATGCCATTATCCTGGCGGCATCGGGTCTCATTCGACTGGAGCTGGGAGACCGCATTACCTCCTTTATTCC
GGTGGAGCAGTCATTACCGGCTAATGGACAAGGCGCACTGGGTATTGAGTGCCGCAGCGATGACGACGAAATGAAAGCCT
TACTTGCACCGCTGCAATGTCAGGAAACCCGTACCCGGGTGTTAGCTGAACGGGCAATGAACCGCGGGCTGGATGGCGGC
TGTCAGGTGCCTATTGGTGCTTATGCAGAGCTGGAAGGTGATGAAGTCTATTTACGCGGCCTGGTTGGTGAACCTGATGG
CGGAAAAGTGCTTCGTGATGAAGTGCGCGGCCCGGCGTCTAAAGCCGAAGAGTTAGGTTCAGAGCTTGCTGAGCGGTTAC
TTAAACAAGGTGCAGCTGAAATTCTGAGCGCAGTCTATGACAGTGAATCCAGTCACTCATAA

Protein sequence :
MTQRVRIATRKSKLALWQAEHIQQRLEELHPGLSVELVPMSTKGDVILDTPLAKIGGKGLFVKELEVAMLEGRADIAVHS
MKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNELPEGAVVGTCSLRRRCQVKEQFPHLVIKDLRGNVQTRLRKLDE
GEFDAIILAASGLIRLELGDRITSFIPVEQSLPANGQGALGIECRSDDDEMKALLAPLQCQETRTRVLAERAMNRGLDGG
CQVPIGAYAELEGDEVYLRGLVGEPDGGKVLRDEVRGPASKAEELGSELAERLLKQGAAEILSAVYDSESSHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-81 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-81 61