Gene Information

Name : hslU (K734_12365)
Accession : YP_008035966.1
Strain : Idiomarina loihiensis GSL 199
Genome accession: NC_021286
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2630205 - 2631557 bp
Length : 1353 bp
Strand : -
Note : COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit

DNA sequence :
ATGTCTGAGATGACCCCAAGAGAAATTGTAGACGAATTAAACCGACATATTATTGGTCAGGATAAAGCCAAACGCGCTGT
CGCTGTTGCTTTGCGTAATCGCTGGCGCCGGATGCAGCTGGATGACGAGCTGCGTCAGGAAGTAACACCTAAGAATATCT
TAATGATAGGTCCTACCGGTGTGGGCAAAACGGAAATTGCCCGTCGGCTGGCTAAATTAGCGAGAGCGCCTTTTATTAAA
GTTGAAGCGACTAAGTTCACAGAAGTGGGTTATGTGGGTAAAGAAATTGAATCCATTATTAAGGATTTAACCGACGTTGC
TGTGAAACAAACGCGCGAAGAAATGATGCAGAAGGTACGTTACCGCGCTGAAGAAGCGGCGGAAGAGCGTATTCTGGATG
TACTGCTGCCACCAGCTAAGACGTCTTCTTCTGGTTGGGCTCAGCAACAGGAAGAGACGCCGGAAAACGATGACCAACGT
GGCACGCGTCAGGTATTCCGTAAGAAATTGCGTGAAGGCCAGCTGGACGACAAAGAAATAGAAATTGATTTAGCCATGCC
GCAAATGGGTGTTGAAATTATGGCGCCGCCGGGAATGGAAGAAATGACGTCGCAATTGCAGAACATGTTCCAGAACATGG
GCAGCGATAAGACCAAGGCGCGCAAAATGCGCATTAAAGACGCTTACAAACAATTGGTTGATGAGGAAGCGGCAAAGCTG
CTGAATCCTGACGACGTTAAAGAAGCCGCTATTGAGTCGGTTGAGCAGAACGGCATTGTCTTTTTAGATGAAATTGACAA
AATTTGTAAGCGTGGTGATACCAGCGGGCCAGACGTTTCCCGCGAAGGTGTACAGCGCGATTTACTGCCTTTGGTTGAAG
GAACCACGGTGAATACCAAGCATGGTATGATAAAAACCGATCATATTCTGTTTATTGCTTCTGGTGCATTCCAGATGAGC
AAGCCGTCAGACCTTATCCCTGAATTACAGGGGCGTTTGCCTATTCGGGTTGAGTTGGAAGCACTGACTAGTGGTGACTT
TGTTCGCATTCTGACAGAGCCAAGCGCGTCGCTGACCACTCAGTATCATGCTCTGCTGAACACTGAAGGCGTAGAGGTAA
GCTTTACTGAAGAAGGTATCCAGCGCATTGCTGAAGTGGCCTTCCATGTAAACGAAACCACAGAAAATATTGGTGCGCGT
CGCTTACATACGGTGCTGGAGCGTTTAATGGAAGAAATTTCGTTCCATGCCACTGACCACAGCGGTGAGAAACTGGTTAT
TGATGCCGACTACGTGAATGAACATGTCGGTGAGCTGTCACAGGACGAAGACTTAAGCCGGTTCATCCTGTAA

Protein sequence :
MSEMTPREIVDELNRHIIGQDKAKRAVAVALRNRWRRMQLDDELRQEVTPKNILMIGPTGVGKTEIARRLAKLARAPFIK
VEATKFTEVGYVGKEIESIIKDLTDVAVKQTREEMMQKVRYRAEEAAEERILDVLLPPAKTSSSGWAQQQEETPENDDQR
GTRQVFRKKLREGQLDDKEIEIDLAMPQMGVEIMAPPGMEEMTSQLQNMFQNMGSDKTKARKMRIKDAYKQLVDEEAAKL
LNPDDVKEAAIESVEQNGIVFLDEIDKICKRGDTSGPDVSREGVQRDLLPLVEGTTVNTKHGMIKTDHILFIASGAFQMS
KPSDLIPELQGRLPIRVELEALTSGDFVRILTEPSASLTTQYHALLNTEGVEVSFTEEGIQRIAEVAFHVNETTENIGAR
RLHTVLERLMEEISFHATDHSGEKLVIDADYVNEHVGELSQDEDLSRFIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 1e-95 46