Gene Information

Name : glnA (K734_12265)
Accession : YP_008035946.1
Strain : Idiomarina loihiensis GSL 199
Genome accession: NC_021286
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 2610764 - 2612173 bp
Length : 1410 bp
Strand : -
Note : COG0174 Glutamine synthetase

DNA sequence :
ATGTCAGCTAATAAGATTTTCGATACCATCAAAGAACACGACGTAAAATTCGTCGATTTACGCTTTACCGATACTAAAGG
TAAAGAGCAACACGTCACTATTCCGGTGTCGCAAATCGATGAAGACTTCTTTGAAGAAGGTAAAATGTTTGATGGTTCAT
CTATTTCCGGCTGGAAAGGCATTAACGAATCAGACATGGTACTGATGCCAGACAACGAGTCTGCGGTGATTGATCCCTTT
ACTGATGAAGTCACATTGAATGTACGTTGTGACATTCTTGAGCCGGAAACTATGCAGGGCTATAGCCGTGACCCTCGTTC
AATTGCAAAGCGTGCGGAAGATTTCCTGCGCTCATCAGGCATTGCAGACGACGCTTACTTCGGTCCGGAACCTGAGTTCT
TCCTGTTCAACGACGTACGTTTCCACACAGACATGAGTGGTTCGTTCTACAAGATTGACGCGGAAGAAGCGAAGTGGAAC
TCAGGCCGTGAATATTCAGAAGGTAACCTGGCTCACCGTCCTGGAGTAAAAGGCGGCTACTTCCCGGTACCTCCGGTAGA
CTCAGCGCACGACATTCGTGGCACCATGAGCTTAGTAATGGAAGACATGGGTATGGTTGTTGAAGCCCATCACCACGAAG
TAGCAACAGCAGGTCAGAACGAAGTGGCTACACGCTTCAATACTCTGACTAAGAAAGCTGATGAACTGCAGGTTTATAAG
TATGTGGTGCATAACGTCGCGCACTCTTACGGCATGACCGCAACCTTTATGCCGAAGCCACTGGTTGGCGATAACGGCTC
TGGCATGCACGTGCATATGTCACTGAACAAAGGCGGCGAAAACTTATTTGCCGGCGACCAGTACGCAGGCTTGAGCGAAA
CCGCGCTGTTCTATATTGGCGGTATTATTAAGCACGCACGTGCCATTAACGCTTTTGCGAACGCCTCTACTAACTCGTAC
AAGCGTCTGGTTCCTGGTTTTGAAGCACCGGTGATGCTGGCTTATTCCGCCCGTAACCGTTCGGCTTCTATCCGTATTCC
ATTGGTTTCCAGCGCGAAAGGTCGCCGTATTGAAGTGCGCTTCCCTGACCCAAGTGCGAACCCGTACCTGGCCTTTACTG
CGCTGTTAATGGCTGGCCTTGACGGTATCCGTAACAAGATCCACCCTGGCGATGCCATGGACAAAGATTTATACAATCTG
CCTCCTGAAGAAGCGAAAGACATTCCGACCGTTTGTCACTCACTGGAAATGGCTCTGGACGCGCTGGATAAAGACCGCGA
CTTCCTTAAGCAAGGCGGCGTTATGGACGACGACATGATTGATGCCTACATCGATCTTAAGTACAACGAAGTAGAGACAT
TGAAGAAGACTACCCACCCGGTAGAATTCGATATGTACTACAGCGTTTAA

Protein sequence :
MSANKIFDTIKEHDVKFVDLRFTDTKGKEQHVTIPVSQIDEDFFEEGKMFDGSSISGWKGINESDMVLMPDNESAVIDPF
TDEVTLNVRCDILEPETMQGYSRDPRSIAKRAEDFLRSSGIADDAYFGPEPEFFLFNDVRFHTDMSGSFYKIDAEEAKWN
SGREYSEGNLAHRPGVKGGYFPVPPVDSAHDIRGTMSLVMEDMGMVVEAHHHEVATAGQNEVATRFNTLTKKADELQVYK
YVVHNVAHSYGMTATFMPKPLVGDNGSGMHVHMSLNKGGENLFAGDQYAGLSETALFYIGGIIKHARAINAFANASTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPLVSSAKGRRIEVRFPDPSANPYLAFTALLMAGLDGIRNKIHPGDAMDKDLYNL
PPEEAKDIPTVCHSLEMALDALDKDRDFLKQGGVMDDDMIDAYIDLKYNEVETLKKTTHPVEFDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-108 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_008035946.1 glutamine synthetase VFG1399 Protein 2e-111 50