Gene Information

Name : K734_11950 (K734_11950)
Accession : YP_008035883.1
Strain : Idiomarina loihiensis GSL 199
Genome accession: NC_021286
Putative virulence/resistance : Resistance
Product : DNA helicase RecJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2544138 - 2546219 bp
Length : 2082 bp
Strand : -
Note : COG1200 RecG-like helicase

DNA sequence :
GTGGCGGTAAAAGGACTGCAGCACATTCCACTGACGGTACTTAAAGGTGTGGGCGAAAAGGTTGCGGTTAAGCTGCGCAA
GCTTGGCTTAGCCTCTGTCAGTGATGCACTGTTGCATCTGCCGTTGCGGTACGAGGATCGTACTCAGGTAACTGACGTTG
CAAATTTACGTGCGGGTGTGGCGACCAATGTTTTGGTCACGGTGCGGCACGCCGATATCAAGTACGGTCGTAAGCGTATG
CTGATTTGTCAGGCCAGCGACGAAACCGGCAGTATCAGTCTGCGGTTTTTTCAATTTAGCGCGGCTCAGCTAAAGCAATT
CGCACAAGGCACGCAGTTACTAGCCTTTGGCGAAGTGCGTCGGGGCATGACCGGCTGGGAGATGGTTCACCCCGAGTACC
GAATGGTCAAAGCTGGCGAGCCATTGAATATGCAGGAAACTCTGACGCCGGTCTACCCCATGACAGAAGGCGTGACTCAG
GGAATTTTGCGCAAGATCATCGAGCAGGCACTGACGTACCTTCAGCCCGGCTCTTTACCTGAACTGCTGCCTGAAAATTT
AAGACCCCATCAACTTTCTTTAGAGCAGGCTATTTTGACTCTGCACCGGCCGCCGGTGGATGTTCCCCTGGCACTGCTGG
AGCAAGGCGAGCATCCCGCGCAGCAGCGCCTGGCATCGGAAGAACTTATTGCTCACCAGTTAAGTTTGCTGCAGTTACGC
CAGGCTCGACAGGCTCAGGCGGGCTTTACCATAAAAGGCAATGGTGCGTTACAAGAGGCATTTTTAAAGCAGTTGCCGTT
TTCACCCACTGGCGCGCAGACAAGAGTGGTGAAAGAAATTACCAGCGATATGGCGCAAGGTCAGCCAATGATGCGACTGG
TGCAGGGTGATGTCGGCTCAGGCAAAACTCTGGTTGCTGCGCTCAGCGCTCTGGCAGCCATTGAAGCTGGATATCAGGTG
GCTTTAATGGCGCCGACCGAGCTTTTGTCTGAACAGCACGCCATTACTTTTAGCCAGTGGCTGATGCCCCTGGGTATTAA
TGTCGCTTGGTTGAGCGGCAAATCCAAAGGTAAGTCCCGTCGGGAATTGCTGGCACAGTTAAAGCAGGGAGATATTCATT
TACTGGTTGGTACCCACGCGTTGTTTCAGGCGGATGTTGAGTATCGGCGCCTGGCATTGGTGATTATTGACGAACAGCAC
CGTTTTGGTGTGCACCAGCGGTTACAATTACGCGAAAAAGGCGTTCAGGCCGGCGTGCATCCTCACCAGTTAATTATGAC
TGCAACACCCATCCCGCGAACTTTGGCTATGACAGCGTATGCGGATTTAGCCACATCAGTTATTGATGAATTGCCGCCCG
GACGCACACCGGTAACCACGGTTGCCATTCCGGATACCCGTCGGGAACAAATTGTGGAGCGTGTGCGGGAGGTCTGTGCC
ACTGAAGGCCGTCAGGCGTATTGGGTTTGTACCCTTATTGAAGAGTCCGATGTACTTGAATGTCAGGCGGCAGAAGACAC
CGCCAATGACTTGCAGGAGCAATTGCCGGGCTTGAGTATTGGCCTGGTGCATGGCCGGCTTAAACATGAGCAGAAAGAAC
AGGTGATGCAGGCGTTTAAAGCGGGTGATATTGACTTATTGGTCGCAACGACGGTCATAGAGGTTGGGGTGGATGTTCCC
AACGCGTCGCTCATGATTATTGAAAACCCGGAACGGCTGGGCTTAGCTCAGTTACACCAGTTGCGCGGCCGCGTTGGCCG
GGGCTCTGTAGCCAGTCATTGCGTGCTGCTGTATCACAGTCCGTTATCGCAAACTGCACAGCAGAGGCTGGGCGTTTTAC
GCGAAAGTAACGACGGTTTTGTGATTGCACAGCGCGATCTGGAAATTCGTGGGCCGGGTGAATTGCTAGGCCACCGGCAG
ACAGGGTTAGCTGAATTAAAAGTGGCTGACTTAGAGCGCGATGAAGCGTTAATACCAGAAGCCCAAAATATTGCTCAGCA
CGTATTAGAGCATTATCCGCAAAGCGCAGAAGCGCTAATTGAGCGTTGGTTACCGCGTCGTGACCACTATGCTCAGGTGT
GA

Protein sequence :
MAVKGLQHIPLTVLKGVGEKVAVKLRKLGLASVSDALLHLPLRYEDRTQVTDVANLRAGVATNVLVTVRHADIKYGRKRM
LICQASDETGSISLRFFQFSAAQLKQFAQGTQLLAFGEVRRGMTGWEMVHPEYRMVKAGEPLNMQETLTPVYPMTEGVTQ
GILRKIIEQALTYLQPGSLPELLPENLRPHQLSLEQAILTLHRPPVDVPLALLEQGEHPAQQRLASEELIAHQLSLLQLR
QARQAQAGFTIKGNGALQEAFLKQLPFSPTGAQTRVVKEITSDMAQGQPMMRLVQGDVGSGKTLVAALSALAAIEAGYQV
ALMAPTELLSEQHAITFSQWLMPLGINVAWLSGKSKGKSRRELLAQLKQGDIHLLVGTHALFQADVEYRRLALVIIDEQH
RFGVHQRLQLREKGVQAGVHPHQLIMTATPIPRTLAMTAYADLATSVIDELPPGRTPVTTVAIPDTRREQIVERVREVCA
TEGRQAYWVCTLIEESDVLECQAAEDTANDLQEQLPGLSIGLVHGRLKHEQKEQVMQAFKAGDIDLLVATTVIEVGVDVP
NASLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHSPLSQTAQQRLGVLRESNDGFVIAQRDLEIRGPGELLGHRQ
TGLAELKVADLERDEALIPEAQNIAQHVLEHYPQSAEALIERWLPRRDHYAQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 9e-97 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K734_11950 YP_008035883.1 DNA helicase RecJ BAC0356 Protein 0.0 60