Gene Information

Name : K734_10360 (K734_10360)
Accession : YP_008035567.1
Strain : Idiomarina loihiensis GSL 199
Genome accession: NC_021286
Putative virulence/resistance : Virulence
Product : ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2194812 - 2195510 bp
Length : 699 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGATAACGCTAACAAATTTAAGCAAGATCTTCCGCACTGAGCTCATTGAAACCCATGCGTTGCGCGAGGTGAATTTGCA
GGTCAACGAGGGCGAATTTGTCGCTCTCACCGGCCCTTCCGGTTCAGGCAAGTCAACGCTGTTGAATATTCTAGGCACCC
TTGAGGGCTTTGATAGCGGTGACTACTTACTTGATGGGCAATCCGTAAAAGGCTTGTCGGACTCAGCGCTGTCACAGTTA
CGCAACGAAAAAATTGGTTTTATCTTTCAAAGTTTTAACTTAATTAAAGACTTCAGTATCTACGACAACATCGAGCTGCC
TTTACGTTATCGTGGCTTAAAAGCAGCGGAACGCAAACAGCGTATCGAACAAGCATTAGAGCTCGTCGGCCTCCACGCAC
GACGTGACTATCTGCCTGCTCAGTTGTCCGGTGGTCAGCAGCAGCGTGTCGCCATCGCTCGCGCAATTGCCGGTCAACCC
CGCATTCTGCTTGCCGATGAGCCCACCGGTAACCTCGACTCGTTAATGGCTCGTCAGGTTATGGAACTGTTAGAAAAAAT
TAATCAGCAAGGCTGTACCATTTTAATGGTTACCCACGATCCGGATCAGGCTCGCCGTGCTGCCCGCAATATTCAAATTG
TCGATGGCCAACTGCATGACAGCACGCTGTACGAGCCACTGGCAGCTCACAGCGCTTAA

Protein sequence : 
MITLTNLSKIFRTELIETHALREVNLQVNEGEFVALTGPSGSGKSTLLNILGTLEGFDSGDYLLDGQSVKGLSDSALSQL
RNEKIGFIFQSFNLIKDFSIYDNIELPLRYRGLKAAERKQRIEQALELVGLHARRDYLPAQLSGGQQQRVAIARAIAGQP
RILLADEPTGNLDSLMARQVMELLEKINQQGCTILMVTHDPDQARRAARNIQIVDGQLHDSTLYEPLAAHSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-25 45
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-16 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-26 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-26 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-26 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K734_10360 YP_008035567.1 ABC transporter ATPase NC_008702.1.4606598. Protein 1e-37 50
K734_10360 YP_008035567.1 ABC transporter ATPase NC_012469.1.7686878. Protein 1e-41 49
K734_10360 YP_008035567.1 ABC transporter ATPase CP001581.1.gene798.p Protein 2e-28 44
K734_10360 YP_008035567.1 ABC transporter ATPase CP001581.1.gene598.p Protein 6e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K734_10360 YP_008035567.1 ABC transporter ATPase VFG2059 Protein 1e-09 41