|
Name : K734_10195 (K734_10195) Accession : YP_008035534.1 Strain : Idiomarina loihiensis GSL 199 Genome accession: NC_021286 Putative virulence/resistance : Virulence Product : Type II secretory pathway, ATPase PulE-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 2166744 - 2168228 bp Length : 1485 bp Strand : - Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGACTGAAGCCAGTGCCATTGCAACAGCTCGCCTTCCTTTCAGCTTTGCTAAACGCTTTGGCGTGGTGGTTGAGCAGGG TGAGCCGTTAATTTTGCATTGCCGTGCAGGTATTTCGGCTGCTGCGTTAAAAGAAGTTAGGCGCGCGTTGGGTCAACCTG TCACTCTTCAGGAGCATGCCGCAAGCGACTTTGAAAGCCTGTTAACTCGTGCTTATCAACGAGACTCATCGGAAGCCCAG CAGTTAATGGAAGACATTGGCAATGAGTCCGATTTATTCTCTCTTGCTGATGAGCTGCCGCAGACCGAAGATTTGCTCGA AAGCGAAGACGACGCGCCTATTATTAAGCTAATTAATGCGATGTTGAGTGAAGCGATAAAAGAAGGCGCCTCAGATATTC ATATTGAGACTTTTGAGAAAGCTTTGCTTATACGTTTTCGCATAGATGGTGTTTTACGTGAAGTGTTACGACCAAACCGT AAGTTGTCATCGCTGCTGGTGTCGCGCATAAAAGTAATGGCGCAGCTGGATATCGCCGAAAAGCGTGTTCCACAGGATGG TCGTATTTCTTTGTTGATTGCCGGTCGGGCAGTGGATGTACGGGTTTCTACCATGCCGTCTAATCATGGCGAGCGGGTGG TACTGCGTTTGCTGGATAAGAACAACGCAAGGCTTAACTTGACTGAACTGGGAATGACTGACGGGAACCGAAAAATTTTC CAGGAACTGATTTACAAACCCCACGGCATTATTTTGGTAACCGGCCCGACGGGCTCAGGTAAAAGTACGACGTTGTATGC CGGGCTTAGCGAAATTAATTCTAAAGACCGTAATATTCTGACCGTCGAAGACCCTATAGAATACGCCATTGATGGCATTG GGCAGACTCAGGTTAACCCTCGGGTGGATATGACCTTCGCCCGCGGCTTACGCGCTATTTTGCGCCAGGACCCGGACGTA GTGATGGTTGGTGAGATACGTGATGTCGAAACCGCGCAGATTGCTGTGCAGGCGTCGCTCACCGGTCACCTGGTCTTGTC TACATTGCACACCAATACAGCCGCCGGCGCTATTACTCGTCTGGAAGACATGGGCGTAGAACCTTTCCTGCTTTCATCGA GCTTATTGGCGGTGTTATCACAGCGCCTGGTGCGGACACTCTGTAGCGAGTGCAAACAGCCGCACCAGCCTGATGACGAA GAAAAGAATATGCTGGGCCTTGATGCTTCAGATACGAGTGTGATTTATCGTGCAGGGAGTTGTGAACGATGCAATCACAC CGGTTATCGTGGACGAACCGGTATTCACGAACTGCTGCTGGTGGATGACCACGTACGTGAGTTAGTCCATAACGGTCACG GTGAGCAGTCTATTGAAAAGTATATTCGGCAGTCGACCCCAGGTATTCGCCAGGACGGCTTAGCAAAAGTACTGAAAGGC AAAACAACGCTGGAAGAAGTGCTGCGGGTTACCCGCGAGGAGTAG Protein sequence : MTEASAIATARLPFSFAKRFGVVVEQGEPLILHCRAGISAAALKEVRRALGQPVTLQEHAASDFESLLTRAYQRDSSEAQ QLMEDIGNESDLFSLADELPQTEDLLESEDDAPIIKLINAMLSEAIKEGASDIHIETFEKALLIRFRIDGVLREVLRPNR KLSSLLVSRIKVMAQLDIAEKRVPQDGRISLLIAGRAVDVRVSTMPSNHGERVVLRLLDKNNARLNLTELGMTDGNRKIF QELIYKPHGIILVTGPTGSGKSTTLYAGLSEINSKDRNILTVEDPIEYAIDGIGQTQVNPRVDMTFARGLRAILRQDPDV VMVGEIRDVETAQIAVQASLTGHLVLSTLHTNTAAGAITRLEDMGVEPFLLSSSLLAVLSQRLVRTLCSECKQPHQPDDE EKNMLGLDASDTSVIYRAGSCERCNHTGYRGRTGIHELLLVDDHVRELVHNGHGEQSIEKYIRQSTPGIRQDGLAKVLKG KTTLEEVLRVTREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-158 | 67 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-158 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| K734_10195 | YP_008035534.1 | Type II secretory pathway, ATPase PulE-like protein | VFG2048 | Protein | 6e-157 | 66 |
| K734_10195 | YP_008035534.1 | Type II secretory pathway, ATPase PulE-like protein | VFG0182 | Protein | 3e-142 | 65 |
| K734_10195 | YP_008035534.1 | Type II secretory pathway, ATPase PulE-like protein | VFG1876 | Protein | 1e-128 | 58 |
| K734_10195 | YP_008035534.1 | Type II secretory pathway, ATPase PulE-like protein | VFG2426 | Protein | 7e-74 | 47 |
| K734_10195 | YP_008035534.1 | Type II secretory pathway, ATPase PulE-like protein | VFG1880 | Protein | 2e-79 | 43 |
