Gene Information

Name : K734_10190 (K734_10190)
Accession : YP_008035533.1
Strain : Idiomarina loihiensis GSL 199
Genome accession: NC_021286
Putative virulence/resistance : Virulence
Product : Type II secretory pathway, component PulF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2165514 - 2166740 bp
Length : 1227 bp
Strand : -
Note : COG1459 Type II secretory pathway, component PulF

DNA sequence :
GTGGCAGCATTTGAGTACCAAGCCGTTGAAGCTAATGGCAGAAAGAAAAAAGGTGTACTGGAAGCCGATACTGAGCGACA
GGTACGTCAGTTATTGCGTGAAAAAGGCTTAATGCCTTTAACCATTGAACCTGCCGCTGATCAAGACAGAAAGAAAACCT
TACAGCCCCGATTTGGGCTTCCACAGCGTAAGGTTAAAGCGCAGGACTTGGCATTAATTACCCGTCAGTTATCCACCTTA
GTAGGTTCAGCGTTGCCCATTGAGCAGGCATTGTTAGCGGTTGCTGATCAAACCGAAAAGCCGCGCCTGAAAAAGTTACT
GATGTCGGTACGCAGTAAAGTGGTTGAAGGTTATGGCCTTGCCGAAGCTATGTCGGAGTTTCCCGGTGTTTTTGATTCTT
TATATACCGCAATGGTCGCTGCAGGTGAAAAATCCGGCCATTTAGACACCGTACTGGATGAGCTGGCAAACTATACCGAG
CAGCGGCAGCACATGAAAAGCCAGTTGACTCAGGCGCTAATTTATCCGCTTATGCTGACTTTGGTTGCCATTGGCATTGT
GGTTTTTCTGTTGGTTTCTATTGTGCCGCAAATAGTGGATAACTTTTCAACCATGGGCCAGGACTTGCCGCCAACCACTC
TGGCGATGATAGCCATTAGTGAATTCTTGCAAAACTGGGGGCTGTGGTTACTTATTGGTATTGCTTTGGTACTGGTGGCC
TTTAACCAGTGGTTGAGAAATGAAAAGAACCGCCTGAAATATCATCGAAGGCTGTTAAAACTTCCCATGCTGGGTAAGGT
CATAAGAGGTGTGAGTACCGCCCGTTTTGCCCGGACTTTAAGTATACTGACGTCCTCGGCGGTTCCTTTGCTTGATGGAC
TACGTATTACTTCATCAGTTATCGGTAATTTGGCCATACGCCAGGCGGTAGATGAAGCGGCCGGACGCGTTCGCGAAGGG
GCGTCAATGCGCGGTGCGTTGCAGGAAACGGGGTTGTTCCCACCAATGATGCTGCACATGATAGCGGCAGGTGAGAAGTC
CGGTGAACTGGAACAAATGTTAAAACGTTCAGCCGATAATCAGGACAAAGAATTTGAAAACTTGGTGTCGGTCAGCTTAA
AAGTATTTGAGCCGGTGTTGATAGTGACGATGGCAGGTATCGTCTTCTTTATTGTGCTGTCTATCATTCAACCCATTTTA
CAATTAAATAATAGTGTAGGGCTTTAG

Protein sequence :
MAAFEYQAVEANGRKKKGVLEADTERQVRQLLREKGLMPLTIEPAADQDRKKTLQPRFGLPQRKVKAQDLALITRQLSTL
VGSALPIEQALLAVADQTEKPRLKKLLMSVRSKVVEGYGLAEAMSEFPGVFDSLYTAMVAAGEKSGHLDTVLDELANYTE
QRQHMKSQLTQALIYPLMLTLVAIGIVVFLLVSIVPQIVDNFSTMGQDLPPTTLAMIAISEFLQNWGLWLLIGIALVLVA
FNQWLRNEKNRLKYHRRLLKLPMLGKVIRGVSTARFARTLSILTSSAVPLLDGLRITSSVIGNLAIRQAVDEAAGRVREG
ASMRGALQETGLFPPMMLHMIAAGEKSGELEQMLKRSADNQDKEFENLVSVSLKVFEPVLIVTMAGIVFFIVLSIIQPIL
QLNNSVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 9e-95 53
gspF YP_854405.1 type II secretion protein GspF Not tested PAI I APEC-O1 Protein 1e-94 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K734_10190 YP_008035533.1 Type II secretory pathway, component PulF VFG2049 Protein 5e-92 53
K734_10190 YP_008035533.1 Type II secretory pathway, component PulF VFG0181 Protein 2e-91 48
K734_10190 YP_008035533.1 Type II secretory pathway, component PulF VFG1870 Protein 9e-90 44