Gene Information

Name : K734_09415 (K734_09415)
Accession : YP_008035378.1
Strain : Idiomarina loihiensis GSL 199
Genome accession: NC_021286
Putative virulence/resistance : Unknown
Product : riboflavin-specific deaminase/reductase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1998981 - 2000108 bp
Length : 1128 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
ATGACTGAATTAAACCCGCAGTACTTTGACCATCAAATGATGCACCGTGCGTTAATGCTGGCGCGGCGCGGACTGATGAC
GACCAGGCCGAACCCTGCGGTTGGCTGTGTCATTACTCTCGGGACTGAAGTTGTTGGTGAAGGCTGGCATCATCAGGCTG
GCGAACCTCACGCTGAAGTACATGCTTTGCGCGCGGCAGGACAAAAAGTCAGGGGCGCAACGGCTTATGTCACGTTGGAG
CCATGCAGTCATATTGGTCGTACACCGCCTTGTTGCGATGCGTTAATTGAGGCCGGAGTAAAACGTGTTGTGGTTGCCAT
GCAGGATCCAAACCCTAGGGTCAGCGGTAATGGTATTCAGCGTCTGAAAGCTGCGGGTATTTCTGTGGACGTCGGTGTAC
TGCAATTGGCTGCGGAGAGTCTGAATCCGGGGTTTATTTCCCGAATGACACGACAACGTCCATGGGTAACCCTAAAAATG
GCAACCTCACTGGATGCAAAAACGGCGTTGTCAGATGGCCGCAGTCAATGGATAACGTCCTCTGACTCTCGCAGTGATGT
GCAGTTTTTTCGGGCACAGGCCGACGCGATTCTGAGTGGTGCTGCAACGATTCTGGCTGACGATCCTAAATTGACAGTGC
GTGTTGATCAGTGGCCAAAATCAAGACCGCTGCCTGAGCCTTTAAAACAGCCGGTACGTATTATTATTGACAGTCAGCAC
AGGGTGAATGACGAGGCCAGGGTTTTTGACTCTCCGGCGCCGGTGTGGTTAGTGCGAACAACTCCTGGTAAACCCAGTTG
CCATCCACATTGTCATGAATTAATTATTGCCGCAGACCCTAACGGTAAAGTGAGTCTGCCGGCGCTTATGGTTGAATTGG
CTAACCGCGAAATTAACCAGTTATGGACTGAGTGTGGGGCGAATTTGGCGGGCGCTCTTATTCAGCAGCAATTATGCGAC
AGATTGATGATTTACAGTTCGGGTCAGTTATTGGGCCATCATGGACGTTCGGTTATCGACATGAACGAGCCGTTGAATTT
AGCTTCAGCACCAAGGTTTAAAATTATTGATCGTCGGCAGGTAGGCCCTGATCAACGCTTGGTAGCAGTACCTCATACAC
AAGATTAA

Protein sequence :
MTELNPQYFDHQMMHRALMLARRGLMTTRPNPAVGCVITLGTEVVGEGWHHQAGEPHAEVHALRAAGQKVRGATAYVTLE
PCSHIGRTPPCCDALIEAGVKRVVVAMQDPNPRVSGNGIQRLKAAGISVDVGVLQLAAESLNPGFISRMTRQRPWVTLKM
ATSLDAKTALSDGRSQWITSSDSRSDVQFFRAQADAILSGAATILADDPKLTVRVDQWPKSRPLPEPLKQPVRIIIDSQH
RVNDEARVFDSPAPVWLVRTTPGKPSCHPHCHELIIAADPNGKVSLPALMVELANREINQLWTECGANLAGALIQQQLCD
RLMIYSSGQLLGHHGRSVIDMNEPLNLASAPRFKIIDRRQVGPDQRLVAVPHTQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-55 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-55 43