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Name : K734_08115 (K734_08115) Accession : YP_008035120.1 Strain : Idiomarina loihiensis GSL 199 Genome accession: NC_021286 Putative virulence/resistance : Unknown Product : superfamily I DNA/RNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 1728769 - 1731501 bp Length : 2733 bp Strand : + Note : COG1112 Superfamily I DNA and RNA helicases and helicase subunits DNA sequence : ATGTTCTCACTAATAGTAAATGGCCAGGATAAAACCCGACAAATAGCTGATTGGAAAATATTTAAAGGTTCAGAGGGACA GTTCGTTCTTAAGTGCATCTTTCGCTCTGATAAAGCCTTCTTTCGTTCTCTAGAAGAATGTGAGATCACTCCTACTGAAG AAGTCAAAGACAAGCTTCTTATAACAAAGAATGGCTCCAAAGTAAGTACTATCGAGAGTGCGTTAATCTACGCTAATAAA TATGCCATTGTTCACTACCCTGGCTCATCAGAGCCATATCTAATGAAGATGGACGCTATCGAATTTACTGATACGGCCAA CATCAAAAACGGCACCGTCTTTAATTATTTTACCTCAGTAACCAATGCTCGAATGAACCTAGCTCCCTCGGGAGAAGAGC GGGATATTGCCGAGAACATAGCTAAGCAACTAGAAAAAATAGAACCTTATCCAGAAACTGCTCTATTCTCTTATTGCACA GGAAAAAGTCAACAAAGGGCCAAGCCGAACGGTCTAGTATACCCGTTCGGAATTAACTTAAGTCAGCAACAAGCTGTCCA GCAGGCTTTTTGCTCTCAAGTCAGTATTATTGAGGGGCCGCCTGGTACAGGGAAAACACAAACAATACTAAATATTCTCG CTAATATCGCTTTACGAGGGGAAAAGGCAGCCATTCTTTCCAATAACAATCCTGCAGTAGAGAACGTTTACGAAAAGTTA GAAAAAAGTAGTTTAGGTTACTTAGCTGCCAAATTAGGTAGTGTTCAGAATCGAAAAGACTTCTTCGCAAGTTTACCTAT GAAGCCAAAGGAAAAACCTAACCAGGCTAAGCCACTTGAAGATATAACAAGCCAAATACAACGACTAGAGCAGCTTCTCA GCGCTCAAAATGAAGCATCTAAGCTACGAAGCCAAATCAGTGAATTAAAAATCGAGCGCAAACGTTTGTTAGGTTGGCAG GACAAAAGTATTCATAAGCCGATAATGCAACCGAACAAATATAAGCTGTCTCCACAAAAAATAACGGACTTTATCGCTTA CCTTACCGATATTTCTGAAAAGCGCATTACGCTATGGAATCGGCTCGAACTATGGCTACATTTCCGTATTCTCAGAACCA AACTCTTTAATACATGGGAGAAGCGAAAAAGCGTCATTCATGCGCTTCAGCTTCTTTATTACGACTACGCCTTACAAGAG AAAACAGCAGCATTAAAAACGCAAGAAGAAATACTTGAGCAGAGTAACTTTAAGGTTTTGCTCGAAACAGTTACTAATTC CTCAATGGCGTACCTGAAAAGCTCACTATTTGATCAAGTATCATCCCATGAAGACTTTGATTCAGAAAATTACCGTCAAA ATTTTCATCAATTTTTGCAGCGTTTTCCTATAATGGGTAGCAGTACTCATTCGATTATAAACTCTCTCGATCAAGGAACG ATCCTAGATTTTGCCATCATCGATGAAGCTTCTCAGCAAGATATTATTCCTGGGATACTAGCTTTAGGATGCGCGAGAAA CGTGATCATTGTAGGTGACCGAAAACAGCTTCCACATATTCCTAATCAGACGGGAATACTACCGCCAAGTGACATGTATG ACTGTGAAAAACACAGCTTGCTTGAATCTTTTACTCGAGTGTTCAGCGGATCCATTCCAATAACTTTGCTTAAAGAGCAT TATCGGTGTCACCCTAAGATCATTCAGTTCTGTAACCAACAGTTCTATAATAATGAACTCATTCCAATGAGGGACGACAC CGCTAAAAATCCTCTGGAGCTTATCGTCACAGCTAAAGGCAATCACGCACGAGGTTACTCTAACAAAAGAGAGTTAGAAT CACTCATTAAAGTTCAGACTGAAAATGAAGGAGCGGGATGGGACGAAAGGAATAGTAAAGGGTTCATAGCACCATACAAT GCACAAGTTAACCTATCTCGCTCTCACTTACCGACAGACTTTGTTAGAAAGACAACGCATAAATTTCAAGGACGCGAGTG TGATGAGATTGTGTTTTCGACCGTCTTAGATAAAAAGCTAAGCAATCAAAGTGAACGTAAGATTACGTTCGTCGACAACC CTAACCTTGTCAACGTTGCCGTTTCTCGTGCTAAAGAGAAGTTTACTCTAGTCACTGGCGACAATGTTTTTACTGCTGGT AACAGCAGTATCGCCGCATTAGTTCGTTATATGGAGTATTACGGTGATCAATCAAGTATATATCACGCGCCTGTTATTTC TTCCTTCGATTTACTGTATGACGAGTACGATCGGTCACTAGAAAAGCTAAGAACAAAATTAAGACCTGAAGACTCACAGT ACAAGTCAGAACAAATCGTTGCTCAAGAACTGCGTCAGTTGTTATCCGACGAAAAGTATAGAGAGTTTACGTTTCATGCT GAGGTTGCGCTCATCCAGTTAGTCTCTCCCAACTTAGAGGACCTGACTCAAGCCGAGCTCACATTCATGAGGAATCTATC GAGATGTGACTTCGTTTTCTATTACAGAGTTGGCAAGCAACCATTAGCTGTTATTGAGGTTGATGGTGGACACCATAACA CTCCGGAGCAAAAGCGCCGAGACGCGCTTAAAAATAGTATTTTAGAGAAAGCTGGACTCCCCCTACTTCGTTTGAATACA GATGAAGCCCATGTCTCTAGAAATATAAGCTCTTTTCTTGATACTTTAAGGCAAGCCTGTGATAAGCCGAACGATCTCGA ACTCACCGGCTAA Protein sequence : MFSLIVNGQDKTRQIADWKIFKGSEGQFVLKCIFRSDKAFFRSLEECEITPTEEVKDKLLITKNGSKVSTIESALIYANK YAIVHYPGSSEPYLMKMDAIEFTDTANIKNGTVFNYFTSVTNARMNLAPSGEERDIAENIAKQLEKIEPYPETALFSYCT GKSQQRAKPNGLVYPFGINLSQQQAVQQAFCSQVSIIEGPPGTGKTQTILNILANIALRGEKAAILSNNNPAVENVYEKL EKSSLGYLAAKLGSVQNRKDFFASLPMKPKEKPNQAKPLEDITSQIQRLEQLLSAQNEASKLRSQISELKIERKRLLGWQ DKSIHKPIMQPNKYKLSPQKITDFIAYLTDISEKRITLWNRLELWLHFRILRTKLFNTWEKRKSVIHALQLLYYDYALQE KTAALKTQEEILEQSNFKVLLETVTNSSMAYLKSSLFDQVSSHEDFDSENYRQNFHQFLQRFPIMGSSTHSIINSLDQGT ILDFAIIDEASQQDIIPGILALGCARNVIIVGDRKQLPHIPNQTGILPPSDMYDCEKHSLLESFTRVFSGSIPITLLKEH YRCHPKIIQFCNQQFYNNELIPMRDDTAKNPLELIVTAKGNHARGYSNKRELESLIKVQTENEGAGWDERNSKGFIAPYN AQVNLSRSHLPTDFVRKTTHKFQGRECDEIVFSTVLDKKLSNQSERKITFVDNPNLVNVAVSRAKEKFTLVTGDNVFTAG NSSIAALVRYMEYYGDQSSIYHAPVISSFDLLYDEYDRSLEKLRTKLRPEDSQYKSEQIVAQELRQLLSDEKYREFTFHA EVALIQLVSPNLEDLTQAELTFMRNLSRCDFVFYYRVGKQPLAVIEVDGGHHNTPEQKRRDALKNSILEKAGLPLLRLNT DEAHVSRNISSFLDTLRQACDKPNDLELTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1202 | NP_286737.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 55 |
| Z1642 | NP_287145.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 55 |
| S15 | AAQ19138.1 | putative UvrD/REP helicase-like protein | Not tested | PAI I CL3 | Protein | 0.0 | 52 |
| uvrD2 | ADD91734.1 | putative UvrD/REP helicase-like protein | Not tested | PAI-I AL862 | Protein | 0.0 | 52 |
