Gene Information

Name : fliP (K734_05985)
Accession : YP_008034694.1
Strain : Idiomarina loihiensis GSL 199
Genome accession: NC_021286
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1279167 - 1279913 bp
Length : 747 bp
Strand : -
Note : COG1338 Flagellar biosynthesis pathway, component FliP

DNA sequence :
ATGAACCGCTGGTTGCTGCTTTGTATTTTAGCCGTGTTGTGTTTGCTGCCTGAGCAGGCTTTCGCCTGGCAGGATCTTAC
TGCGGTTACGGTAAAAACAAACCCCGATGGTAGTGAAGAGTACTCTGTAACGCTGCAAATTTTGGCGATAATGACGGCGC
TGACCTTCATTCCCGCTATGGTCATTATGATGACCTCATTTACCCGAATTATTATCGTTTTAGCTATTCTGCGTCAGGCC
ATCGGTCTGCAACAGTCGCCTTCTAATCAGGTGCTACTGGGCATCGCGCTGTTTTTAAGCTTTTTCATCATGACGCCGGT
TTTAAACGAAATAAATGACAAAGCGTTACAACCCTACTTAAATGAAGAGATACAGTCGATGGAGGCGGTCGACAGAGCAA
AAGCGCCGATAAAAGCCTTTATGCTGGCGCAAACACGCTTAACCGATTTAGAAACCTTTGTCGAAATATCAGGAACCGAG
GGCGTGCAAGAGCCGGAGGACGTGCCTATGTCGGTGCTTATTCCGTCCTTTATAACTTCCGAGCTAAAAACCGCCTTTCA
AATAGGCTTCATGCTGTTTATTCCGTTTTTGATTATTGATTTGGTGGTCGCCAGCGTTCTCATGGCCATGGGTATGATGA
TGCTGTCGCCCATGATCGTATCGCTGCCGTTTAAACTCATGTTGTTCGTGCTGGTTGATGGCTGGAGTTTAACCATGAGT
ACCCTGGCCGGAAGTTTCGGGGTTTAG

Protein sequence :
MNRWLLLCILAVLCLLPEQAFAWQDLTAVTVKTNPDGSEEYSVTLQILAIMTALTFIPAMVIMMTSFTRIIIVLAILRQA
IGLQQSPSNQVLLGIALFLSFFIMTPVLNEINDKALQPYLNEEIQSMEAVDRAKAPIKAFMLAQTRLTDLETFVEISGTE
GVQEPEDVPMSVLIPSFITSELKTAFQIGFMLFIPFLIIDLVVASVLMAMGMMMLSPMIVSLPFKLMLFVLVDGWSLTMS
TLAGSFGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-20 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-20 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-20 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-21 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_008034694.1 flagellar biosynthesis protein FliP VFG1259 Protein 1e-65 69
fliP YP_008034694.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-55 61
fliP YP_008034694.1 flagellar biosynthesis protein FliP VFG2494 Protein 2e-54 60
fliP YP_008034694.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-48 53