Gene Information

Name : NH44784_009701 (NH44784_009701)
Accession : YP_008028071.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Unknown
Product : Superfamily II DNA/RNA helicases, SNF2 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1026345 - 1028624 bp
Length : 2280 bp
Strand : -
Note : -

DNA sequence :
ATGTCCCTCGATCTCGAAACCACTGCCGCTGAATCCGCGCCCGTACAGGGCGAACTGCTCGACGCGGAATCTTCCCCTCT
GACCCTGAGCCTTCAGGATTTTGTCGGCGAGTTCGGCGACGAACTACTCGACGCCCTCAACAGCGCTAATCCGCCGGTCT
ATACCGGCCAACCGCAGGCGCACCGGCAACTGGTGGTCGCCAGCCTCAAGCGCAAGCTGTTCCCAGCCCAGGCCGAAGTC
GTCCACGCCGCCGCCGAGCTGCTGATCGACCGTGGCGAACGTGCTGCGATCGTCAATGGCGAGATGGGCTGCGGCAAGAC
GACCGTCGGCATTGCCACGGCCGCCGTGCTCAACGCCGAAGGCTATCGCCGCACTCTGGTGCTGTCGCCGCCCCACCTGG
TTTACAAGTGGCGGCGCGAGATCCAGGAGACGGTGGCCGGTGCCAAGGTGTGGGTACTCAACGGGCCGGATACGCTCGTC
AAGCTCATCAAGCTGCGCGAGCAGTTGGGCGTGCAGCCCACGGGCCAGGAGTTCTTCGTCCTGGGGCGCGTCAGGATGCG
GATGGGCTTTCACTGGAAGCCTGTCTTCACCACGCGGCGCACCCGCCACGGCGACGTGGCGGCCTGCCCGGACTGCGGCA
CGGTCATCACCGACCTCGACGGCGAGCCGGTCAACCCGATCGCGCTCCAAGCCGAGGAGTGCCGCAGGAAGTGCGGCCAC
TGCGCCGCGCCCCTGTGGACACTGATCCGCCCGCGCAGTCTGTCCGGCAGCGACCAGTCCTCGGCCGTGCTCAAAGCCTT
AAAGCGCATACCGACCATCGGAGAGGTCACCGCGCAGAAGCTGATGCAAAAGTTCGGTGACGGGTTCCTGGCGTCGATGC
TCGGCGACAACATCCATGAGTTCATCAACCTCATGGATGGCAACGGCGAGCTGGTGTTTTCCGACCGTCAGGCCACGCGC
ATGGAACGTGCGATGGCCAACATGGAGTTCGGCTTTGGCGAGGGCGGCTATCAGCCGTCCGAGTTCATCAAACGCTACCT
GCCGCAAGGCACGTTCGACCTGCTCATCGCCGATGAGGCACATGAGTACAAGAACGGGGGCAGTGCCCAGGGCCAGGCCA
TGGGCGTGCTGGCGGCGAAGGCTCGCAAGACCTTGCTGCTGACCGGCACGTTGATGGGCGGCTACGGGGACGACCTGTTC
CACCTGCTGTTCCGAGCCCTTCCGGGGCGGATGATCGAAGACGGCTACCGCCCGACCACGAGCGGCAGCATGACCTCGGC
TGCGATGGCGTTCATGCGCGATCACGGGGTGTTGAAGGACATCTACTCCGAGAGCACCGGCACGGCGCACAAGACGGCCA
AGGGCACCAAGGTATCGGTGCGCACGGTCAAGGCCCCGGGGTTTGGCCCCAAGGGCGTGCTGCGCTGCATCCTGCCGTTC
ACGATCTTTCTCAAGCTCAAGGACATCGGTGGCAACGTCCTGCCGCCGTATGACGAGGAGTTCCGTGAAGTCGCGATGGA
CACGGCGCAAGCCGCGGCCTACCGCGATCTGGCGGGTCGGCTGACCGCGGAGCTGAAACAGGCTCTGGCGCGACGCGATA
CGACCTTGCTGGGTGTGGTCCTCAACGTGCTGCTGGCCTGGCCGGATTGCTGCTTCCGGTCGGAGACCGTGGTGCATCCG
CGCACGCGCAACACCTTGGCGTTTGTCCCGGCTCAGTTCAACGAGTTCGAGATCAGCCCCAAGGAGCGTGAGCTGATCGA
CATCTGCAAAGAGGAGAAGGCGCAGGGCCGCAAGGTCCTGGCCTACACGGTCTATACCGGCACGCGCGACACCACGTCGC
GCCTGAAGGTGTTGCTGGAGCAGGAAGGCTTCAAGGTGGCGGTGCTGCGCGCGAGCGTGGATGCCAGCCGCCGCGAAGAC
TGGATCGCCGAGCAACTGGACCGTGGCATCGACGTGCTCATCACCAACCCCGAGTTGGTCAAGACGGGGCTGGACCTGTT
GGAGTTCCCGACGATCGTGTTCATGCAGTCGGGCTACAACGTGTACTCGCTCCAGCAGGCGGCACGCCGCTCCTGGCGCA
TCGGGCAGAAGCAGCCCGTGCGTGTGATCTACCTCGGCTACGCCGGTTCCTCGCAGATGACCTGCCTGGAGCTGATGGCC
AAGAAGATCATGGTCTCGCAGTCCACCTCGGGCGACGTGCCCGAATCCGGGCTCGATGTCCTGAACCAGGACGGTGATTC
CGTCGAGGTCGCACTGGCCCGGCAGCTTGTCGCCGCATGA

Protein sequence :
MSLDLETTAAESAPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYTGQPQAHRQLVVASLKRKLFPAQAEV
VHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLV
KLIKLREQLGVQPTGQEFFVLGRVRMRMGFHWKPVFTTRRTRHGDVAACPDCGTVITDLDGEPVNPIALQAEECRRKCGH
CAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHEFINLMDGNGELVFSDRQATR
MERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLF
HLLFRALPGRMIEDGYRPTTSGSMTSAAMAFMRDHGVLKDIYSESTGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPF
TIFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHP
RTRNTLAFVPAQFNEFEISPKERELIDICKEEKAQGRKVLAYTVYTGTRDTTSRLKVLLEQEGFKVAVLRASVDASRRED
WIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMA
KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C71 AAN62165.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 0.0 100
ORF SG81 AAN62302.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 0.0 88
RL063 AAP84188.1 plasmid related protein Not tested PAPI-1 Protein 0.0 72
unnamed ABR13404.1 putative helicase Not tested PAGI-5 Protein 0.0 72
pph67 CAI36108.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 70
yea AAW83099.1 Yea Not tested GGI Protein 2e-176 50